RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 JKAMPQ9P055 326 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 MBD1Q9UIS9 605 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-212ENST00000546744 METTL12A8MUP2 240 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 VASH2Q86V25 355 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 CALHM1Q8IU99 346 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 CADM4Q8NFZ8 388 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 OR4X2Q8NGF9 303 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 OR1B1Q8NGR6 318 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 LRRC29Q8WV35 223 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 AURKAIP1Q9NWT8 199 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-212ENST00000546744 TRPM6Q9BX84 2022 aa11.04□□□□□ -0.64
PTCH1-212ENST00000546744 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 ZNF716A6NP11 495 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 MKRN2OSH3BPM6 223 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 ICAM4Q14773 271 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 OR10J3Q5JRS4 329 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 ORAOV1Q8WV07 137 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 MAP1LC3AQ9H492 121 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 A0A1W2PRS3 328 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 MS4A18H0YCH9 400 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 COX5BP10606 129 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 MS4A18Q3C1V0 323 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 SLC35E4Q6ICL7 350 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 DEFB108BQ8NET1 73 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-212ENST00000546744 GRIFINA4D1Z8 144 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 J3QRE1 110 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 NUBP1P53384 320 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
PTCH1-212ENST00000546744 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
PTCH1-212ENST00000546744 SMAGPQ0VAQ4 97 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 PYY3Q5JQD4 70 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 ZADH2Q8N4Q0 377 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 OR8B2Q96RD0 313 aa11.03□□□□□ -0.64
PTCH1-212ENST00000546744 MARCH11A6NNE9 402 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 J3QW42 95 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 K7ESF4 209 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 IL4P05112 153 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 CBLN1P23435 193 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 LINC01559Q495D7 138 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 TTC9CQ8N5M4 171 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 OR1K1Q8NGR3 316 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 RAB37Q96AX2 223 aa11.02□□□□□ -0.64
PTCH1-212ENST00000546744 TMEM262E9PQX1 116 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 RAMP1O60894 148 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 IGFBP3P17936 291 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-212ENST00000546744 GCHFRP30047 84 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 UQCRFS1P47985 274 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 LYZP61626 148 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 ACSF3Q4G176 576 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-212ENST00000546744 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-212ENST00000546744 C14orf144Q96I85 54 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 RASL11BQ9BPW5 248 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 TMEM56-RWDD3S4R434 201 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 BRWD1Q9NSI6 2320 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 M0QZ24 198 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 AMBPP02760 352 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 FHL5Q5TD97 284 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 GCSAMQ8N6F7 178 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 FAM131CQ96AQ9 280 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 RPEQ96AT9 228 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 HIST1H4GQ99525 98 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 WFDC6Q9BQY6 131 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 GPR35Q9HC97 309 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 SPCS1Q9Y6A9 102 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 IGHV1OR21-1A0A087WYE8 117 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 TCF23Q7RTU1 214 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 SLC25A40Q8TBP6 338 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 RTBDNQ9BSG5 229 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-212ENST00000546744 MS4A6AQ9H2W1 248 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 NRN1Q9NPD7 142 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 RP1P56715 2156 aa11.02□□□□□ -0.65
PTCH1-212ENST00000546744 ASCC3Q8N3C0 2202 aaKnown RBP11.02□□□□□ -0.65
PTCH1-212ENST00000546744 H3BVH4 76 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 M0R3E3 92 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 TSPAN2O60636 221 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 ARL14EPLP0DKL9 152 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 SMIM10L1P0DMW3 83 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 HYAL1Q12794 435 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 WIPI1Q5MNZ9 446 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-212ENST00000546744 PLPPR1Q8TBJ4 325 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 SMIM10Q96HG1 83 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 SIGMAR1Q99720 223 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 FAM60AQ9NP50 221 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 IGHV5-51A0A0C4DH38 117 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 SHISA8B8ZZ34 492 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 IGKV1D-16P01601 117 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 HSPE1P61604 102 aaKnown RBP11.01□□□□□ -0.65
PTCH1-212ENST00000546744 HIST1H1AQ02539 215 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-212ENST00000546744 LOC107984156A0A0G2JMH3 177 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 A0A1W2PP11 408 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF735P0CB33 412 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 ARL17AQ8IVW1 177 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 OR2Z1Q8NG97 314 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 FLYWCH2Q96CP2 140 aaKnown RBP11.01□□□□□ -0.65
PTCH1-212ENST00000546744 GNRHR2Q96P88 292 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 RASL10BQ96S79 203 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms