RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TENM1Q9UKZ4 2725 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 RBMX2Q9Y388 322 aaKnown RBP5.1□□□□□ -1.59
PRKDC-211ENST00000546304 HILPDAQ9Y5L2 63 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 DNHD1Q96M86 4753 aa5.1□□□□□ -1.59
PRKDC-211ENST00000546304 BTBD17A6NE02 478 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 VGLL3A8MV65 326 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF736B4DX44 427 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 LY6LH3BQJ8 138 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 H3BUX3 64 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 M0QYG6 137 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 RAB29O14966 203 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 HOXA3O43365 443 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 TXNL1O43396 289 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 TCF21O43680 179 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 RBBP9O75884 186 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 TUSC2O75896 110 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 PPYP01298 95 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 IGHV4-59P01825 116 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 CSF1P09603 554 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 OR8U9P0C7N5 309 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 PF4V1P10720 104 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 AADACP22760 399 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 PTBP1P26599 531 aaKnown RBP eCLIP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 GPR12P47775 334 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 OR3A3P47888 321 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 REG1BP48304 166 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 TAS2R19P59542 299 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 HERV-K104P61576 105 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF816Q0VGE8 651 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 DYRK1AQ13627 763 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 DIAPH2-AS1Q14236 149 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 AANATQ16613 207 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 RNASE10Q5GAN6 216 aaKnown RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 VAX1Q5SQQ9 334 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 LINC00299Q6ZSB3 139 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF833PQ6ZTB9 187 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 TMEM17Q86X19 198 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 TGIF2LXQ8IUE1 241 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ODF3L1Q8IXM7 274 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 OR8H3Q8N146 312 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 Q8N402 240 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 OR8U1Q8NH10 309 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 OR56B4Q8NH76 319 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 OR5R1Q8NH85 324 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 RTN4IP1Q8WWV3 396 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ST6GALNAC6Q969X2 333 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 MALSU1Q96EH3 234 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ABHD14BQ96IU4 210 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 AGMATQ9BSE5 352 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 MRPL20Q9BYC9 149 aaKnown RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 FXYD6Q9H0Q3 95 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 C11orf54Q9H0W9 315 aaPredicted RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 PRDM13Q9H4Q3 707 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ESM1Q9NQ30 184 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 AKIP1Q9NQ31 210 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 ABCB10Q9NRK6 738 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 PIPOXQ9P0Z9 390 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 VPREB3Q9UKI3 123 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 OR2W1Q9Y3N9 320 aa5.09□□□□□ -1.59
PRKDC-211ENST00000546304 RBM7Q9Y580 266 aaKnown RBP5.09□□□□□ -1.59
PRKDC-211ENST00000546304 FBN1P35555 2871 aaKnown RBP5.09□□□□□ -1.6
PRKDC-211ENST00000546304 IGKV1D-13A0A0B4J2D9 117 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 IGHV1-3A0A0C4DH29 117 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 CLDN34H7C241 214 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TIMM23O14925 209 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 LANCL1O43813 399 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 IFNA2P01563 188 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 PMP2P02689 132 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 CD74P04233 296 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 CD3DP04234 171 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 IGKV1-13P0DP09 117 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 FCGR2CP31995 323 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 IER3P46695 156 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 RFX2P48378 723 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 DYNLT3P51808 116 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 LUMP51884 338 aaPredicted RBP5.08□□□□□ -1.6
PRKDC-211ENST00000546304 FXYD4P59646 89 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 AP3S2P59780 193 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF45Q02386 682 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 BAMBIQ13145 260 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 MEF2DQ14814 521 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 RPL39P5Q59GN2 51 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TRIQKQ629K1 86 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF660Q6AZW8 331 aaPredicted RBP5.08□□□□□ -1.6
PRKDC-211ENST00000546304 FAAP20Q6NZ36 180 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 STEAP1BQ6NZ63 245 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 CFAP161Q6P656 301 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 Q6YL49 198 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 OVCH2Q7RTZ1 564 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 LYSMD2Q8IV50 215 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 ARRDC1Q8N5I2 433 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TMEM86BQ8N661 226 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF645Q8N7E2 425 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 GDPD1Q8N9F7 314 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TMEM229BQ8NBD8 167 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.08□□□□□ -1.6
PRKDC-211ENST00000546304 OR4D10Q8NGI6 311 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 OR4C16Q8NGL9 310 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 SECTM1Q8WVN6 248 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 MOB3AQ96BX8 217 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms