RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ZNRF1Q8ND25 227 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 FDCSPQ8NFU4 85 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 ABHD5Q8WTS1 349 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 NUP210LQ5VU65 1888 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 LRP5LA4QPB2 252 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 MAP1LC3B2A6NCE7 125 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 NEURL1O76050 574 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 SRP19P09132 144 aaKnown RBP8.33□□□□□ -1.08
TRAF1-203ENST00000546084 PGA5P0DJD9 388 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 SLC25A6P12236 298 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 CTSSP25774 331 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 H3F3AP84243 136 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 TMEM171Q8WVE6 324 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 C14orf144Q96I85 54 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 PACRGQ96M98 296 aaPredicted RBP8.33□□□□□ -1.08
TRAF1-203ENST00000546084 MAP1LC3BQ9GZQ8 125 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 VSIRQ9H7M9 311 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 OR2W1Q9Y3N9 320 aa8.33□□□□□ -1.08
TRAF1-203ENST00000546084 F2RP25116 425 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 CATR1Q13166 79 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 KHDC3LQ587J8 217 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 C10orf128Q5T292 105 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 MOGAT3Q86VF5 341 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 OR10P1Q8NGE3 313 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 LYPD6BQ8NI32 183 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 MOB3AQ96BX8 217 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 TMEM222Q9H0R3 208 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 PLEKHA3Q9HB20 300 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 CLEC5AQ9NY25 188 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 CLDN34H7C241 214 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 CDS2O95674 445 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 SOD3P08294 240 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 RTP5Q14D33 572 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 MSMO1Q15800 293 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 CEACAM21Q3KPI0 293 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 FBXW9Q5XUX1 488 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF430Q9H8G1 570 aaPredicted RBP8.32□□□□□ -1.08
TRAF1-203ENST00000546084 POLDIP2Q9Y2S7 368 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 V9GYS6 101 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 SPINT2O43291 252 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 HAND1O96004 215 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 EIF3IQ13347 325 aaKnown RBP8.32□□□□□ -1.08
TRAF1-203ENST00000546084 MRPL41Q8IXM3 137 aaKnown RBP8.32□□□□□ -1.08
TRAF1-203ENST00000546084 SELENOHQ8IZQ5 122 aaKnown RBP8.32□□□□□ -1.08
TRAF1-203ENST00000546084 C18orf12Q96KH6 178 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 RPRMQ9NS64 109 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 CCDC168Q8NDH2 2452 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 DCHS1Q96JQ0 3298 aa8.32□□□□□ -1.08
TRAF1-203ENST00000546084 M0R296 226 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 IFNA1P01562 189 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 MGST1P10620 155 aaKnown RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 MPV17P39210 176 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 FGF12P61328 243 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 TRA2AQ13595 282 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 ABLIM2Q6H8Q1 611 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 CCL17Q92583 94 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 MRPL37Q9BZE1 423 aaKnown RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 CHRNA10Q9GZZ6 450 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF703Q9H7S9 590 aaPredicted RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 CHTOPQ9Y3Y2 248 aaKnown RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 TRAV38-1A0A0B4J264 116 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 H7BYZ3 331 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 RAMP3O60896 148 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 GOSR1O95249 250 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 MMP7P09237 267 aaPredicted RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 TNFRSF9Q07011 255 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 RNFT1Q5M7Z0 435 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 SGK494Q96LW2 274 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 OR4C12Q96R67 309 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 FOXD3Q9UJU5 478 aaPredicted RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 MYO9AB2RTY4 2548 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 DMXL2Q8TDJ6 3036 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 PPIHO43447 177 aaKnown RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 ZG16O60844 167 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 PITX3O75364 302 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 PTBP3O95758 552 aaKnown RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 IRF2P14316 349 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 SCGB2A2Q13296 93 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 ICAM4Q14773 271 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 TMEM211Q6ICI0 200 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 ACSM6Q6P461 480 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 PLPPR1Q8TBJ4 325 aa8.31□□□□□ -1.08
TRAF1-203ENST00000546084 LYRM2Q9NU23 88 aaPredicted RBP8.31□□□□□ -1.08
TRAF1-203ENST00000546084 TANC2Q9HCD6 1990 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 IGHV3-72A0A0B4J1Y9 119 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 PAGE4O60829 102 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF737O75373 536 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 CA11O75493 328 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 DFFBO76075 338 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 RPLP1P05386 114 aaKnown RBP8.3□□□□□ -1.08
TRAF1-203ENST00000546084 TCL1AP56279 114 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 FAM3BP58499 235 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF718Q3SXZ3 478 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 LHFPL4Q7Z7J7 247 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 FGFRL1Q8N441 504 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 GATAD1Q8WUU5 269 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 ACY3Q96HD9 319 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 Q9N2K0 584 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms