RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 GLT8D1Q68CQ7 371 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 ZNF660Q6AZW8 331 aaPredicted RBP6.54□□□□□ -1.36
USP28-215ENST00000545608 ZNF880Q6PDB4 577 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 ZNF773Q6PK81 442 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 FAM131AQ6UXB0 335 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 SBSPONQ8IVN8 264 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 C8orf59Q8N0T1 100 aaPredicted RBP6.54□□□□□ -1.36
USP28-215ENST00000545608 OR2AK2Q8NG84 335 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 ABHD14BQ96IU4 210 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 TMED9Q9BVK6 235 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 TM2D1Q9BX74 207 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 TMEM59Q9BXS4 323 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 TOLLIPQ9H0E2 274 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 ISYNA1Q9NPH2 558 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 FKBP14Q9NWM8 211 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 PIPOXQ9P0Z9 390 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 ABRACLQ9P1F3 81 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 KIAA1456Q9P272 454 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 STEAP1Q9UHE8 339 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 SLC23A1Q9UHI7 598 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 GAB2Q9UQC2 676 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 NUBP2Q9Y5Y2 271 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 SMAD5-AS1Q9Y6J3 95 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 TENM3Q9P273 2699 aa6.54□□□□□ -1.36
USP28-215ENST00000545608 IGHV4OR15-8A0A075B7B6 117 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 A0A087WW49 117 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 TMEM14DPA8MWL7 114 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 LINC01619G3V211 115 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 H0YJW9 148 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 RAB29O14966 203 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 SOCS1O15524 211 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 PROP1O75360 226 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 SAP30O75446 220 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 CDK1P06493 297 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 SPNP16150 400 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 SRMP19623 302 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 LINC00205P59089 165 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 ODF1Q14990 250 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 FAM71F2Q6NXP2 309 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 OVCH2Q7RTZ1 564 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 CEACAM19Q7Z692 300 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 ZNF429Q86V71 674 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 MS4A15Q8N5U1 240 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 KCNG3Q8TAE7 436 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 PHYHIPQ92561 330 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 THRSPQ92748 146 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 TRIM63Q969Q1 353 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 CLCC1Q96S66 551 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 AGMATQ9BSE5 352 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 HDHD3Q9BSH5 251 aaPredicted RBP6.53□□□□□ -1.36
USP28-215ENST00000545608 FAM103A1Q9BTL3 118 aaKnown RBP6.53□□□□□ -1.36
USP28-215ENST00000545608 C11orf54Q9H0W9 315 aaPredicted RBP6.53□□□□□ -1.36
USP28-215ENST00000545608 LPAR5Q9H1C0 372 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 CHMP1AQ9HD42 196 aaPredicted RBP6.53□□□□□ -1.36
USP28-215ENST00000545608 PLEKHJ1Q9NW61 149 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 OR1A1Q9P1Q5 309 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 FOXA2Q9Y261 457 aaPredicted RBP6.53□□□□□ -1.36
USP28-215ENST00000545608 A3GALT2U3KPV4 340 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
USP28-215ENST00000545608 TRBV6-6A0A0A6YYG2 114 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 OR5H14A6NHG9 310 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 C3orf84H3BNL1 204 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 H7C2Y5 167 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 ITGB1BP1O14713 200 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 IGHV3-11P01762 117 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 LGALS1P09382 135 aaKnown RBP6.52□□□□□ -1.37
USP28-215ENST00000545608 SCTP09683 121 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 MC5RP33032 325 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 CEACAM6P40199 344 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 TMEM50BP56557 158 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 GABARAPL2P60520 117 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 OXA1LQ15070 435 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 PLGLAQ15195 96 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 PSG5Q15238 335 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 HSD17B12Q53GQ0 312 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 RNLSQ5VYX0 342 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 CD200R1LQ6Q8B3 271 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 UNQ5815/PRO19632Q6UWF5 114 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 AKAP14Q86UN6 197 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 PPP1R27Q86WC6 154 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 ABHD5Q8WTS1 349 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 ARPC1AQ92747 370 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 MS4A10Q96PG2 267 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 GFI1Q99684 422 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 DIABLOQ9NR28 239 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 AK3Q9UIJ7 227 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 RNF150Q9ULK6 438 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 LSM2Q9Y333 95 aaKnown RBP6.52□□□□□ -1.37
USP28-215ENST00000545608 WASHC3Q9Y3C0 194 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 SORL1Q92673 2214 aa6.52□□□□□ -1.37
USP28-215ENST00000545608 FOXI3A8MTJ6 420 aaPredicted RBP6.51□□□□□ -1.37
USP28-215ENST00000545608 PTGES3LE9PB15 166 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 RBBP9O75884 186 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 HSPB1P04792 205 aaKnown RBP6.51□□□□□ -1.37
USP28-215ENST00000545608 UCHL1P09936 223 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 GP9P14770 177 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 DEFA1P59665 94 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms