RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 CASTOR1Q8WTX7 329 aa10.28□□□□□ -0.76
CIT-214ENST00000544588 C4orf3Q8WVX3 66 aa10.28□□□□□ -0.76
CIT-214ENST00000544588 FAM103A1Q9BTL3 118 aaKnown RBP10.28□□□□□ -0.76
CIT-214ENST00000544588 CABLES2Q9BTV7 478 aa10.28□□□□□ -0.76
CIT-214ENST00000544588 CENPOQ9BU64 300 aa10.28□□□□□ -0.76
CIT-214ENST00000544588 RNF167Q9H6Y7 350 aa10.28□□□□□ -0.76
CIT-214ENST00000544588 SDHAF2Q9NX18 166 aa10.28□□□□□ -0.76
CIT-214ENST00000544588 VSIG4Q9Y279 399 aa10.28□□□□□ -0.76
CIT-214ENST00000544588 TRBV6-7A0A0A0MS04 114 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 CNIH1O95406 144 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 CA2P00918 260 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 CD40LGP29965 261 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 GNG2P59768 71 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 NDPQ00604 133 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 HACD4Q5VWC8 232 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 UNQ5815/PRO19632Q6UWF5 114 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 PPP1R27Q86WC6 154 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 PDPNQ86YL7 162 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.27□□□□□ -0.77
CIT-214ENST00000544588 OR1N2Q8NGR9 330 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 LGALS14Q8TCE9 139 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 GNB4Q9HAV0 340 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 ZNF355PQ9NSJ1 428 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 ZNF580Q9UK33 172 aa10.27□□□□□ -0.77
CIT-214ENST00000544588 IGKV1D-8A0A087WSZ0 117 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 WI2-2373I1.2A0A1W2PRP0 233 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 TMEM235A6NFC5 223 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 K7EIL1 84 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 SHOXO15266 292 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 SLC25A17O43808 307 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 SCGNO76038 276 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 DTYMKP23919 212 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 FXYD3Q14802 87 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 KCTD21Q4G0X4 260 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 ACTBL2Q562R1 376 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 ZNF491Q8N8L2 437 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 BVESQ8NE79 360 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 LFNGQ8NES3 379 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 NUDCD2Q8WVJ2 157 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 UBE2E2Q96LR5 201 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 MS4A10Q96PG2 267 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 TOLLIPQ9H0E2 274 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 FOXA2Q9Y261 457 aaPredicted RBP10.26□□□□□ -0.77
CIT-214ENST00000544588 FBXO7Q9Y3I1 522 aa10.26□□□□□ -0.77
CIT-214ENST00000544588 TRAV18A0A075B6X5 111 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 SEC14L6B5MCN3 397 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 IGLV1-40P01703 118 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 NFYAP23511 347 aaPredicted RBP10.25□□□□□ -0.77
CIT-214ENST00000544588 LUMP51884 338 aaPredicted RBP10.25□□□□□ -0.77
CIT-214ENST00000544588 PITPNAQ00169 270 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 SRSF7Q16629 238 aaKnown RBP eCLIP10.25□□□□□ -0.77
CIT-214ENST00000544588 RTL8BQ17RB0 113 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 ZNF562Q6V9R5 426 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 H1FOOQ8IZA3 346 aaPredicted RBP10.25□□□□□ -0.77
CIT-214ENST00000544588 MINDY2Q8NBR6 621 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 OR5H6Q8NGV6 325 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 ARPC1AQ92747 370 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 HARBI1Q96MB7 349 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 VCX3AQ9NNX9 186 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 TPSG1Q9NRR2 321 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 RHBDL2Q9NX52 303 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 ZMAT5Q9UDW3 170 aaKnown RBP10.25□□□□□ -0.77
CIT-214ENST00000544588 NUBP2Q9Y5Y2 271 aa10.25□□□□□ -0.77
CIT-214ENST00000544588 PLXNB1O43157 2135 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 SPDEFO95238 335 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 DIRAS3O95661 229 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 IGHV3-11P01762 117 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 CTXN2P0C2S0 81 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 EGR2P11161 476 aaPredicted RBP10.24□□□□□ -0.77
CIT-214ENST00000544588 LGALS7P47929 136 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 DGCR2P98153 550 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 EGFEM1PQ0D2K5 195 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 ZNF260Q3ZCT1 412 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 C9orf66Q5T8R8 295 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 TCTEX1D1Q8N7M0 179 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 ALX4Q9H161 411 aaPredicted RBP10.24□□□□□ -0.77
CIT-214ENST00000544588 DCSTAMPQ9H295 470 aa10.24□□□□□ -0.77
CIT-214ENST00000544588 KMT2CQ8NEZ4 4911 aaKnown RBP10.23□□□□□ -0.77
CIT-214ENST00000544588 I3L521 148 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 SOX15O60248 233 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 TUSC2O75896 110 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 FCER2P06734 321 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 OR8U8P0C7N1 319 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 RRASP10301 218 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 ECI1P42126 302 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 TPPP2P59282 170 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 LSM3P62310 102 aaKnown RBP10.23□□□□□ -0.77
CIT-214ENST00000544588 TAGLNQ01995 201 aaKnown RBP10.23□□□□□ -0.77
CIT-214ENST00000544588 ZNF616Q08AN1 781 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 KIAA0141Q14154 515 aaPredicted RBP10.23□□□□□ -0.77
CIT-214ENST00000544588 TIMM50Q3ZCQ8 353 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 Q6ZS49 121 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 OR5T1Q8NG75 326 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 C5orf30Q96GV9 206 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 ADTRPQ96IZ2 230 aa10.23□□□□□ -0.77
CIT-214ENST00000544588 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.23□□□□□ -0.77
CIT-214ENST00000544588 DIABLOQ9NR28 239 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms