RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 OR4F4Q96R69 305 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 SPRY4Q9C004 299 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 OR6C3Q9NZP0 311 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 CACNA1HO95180 2353 aa11.53□□□□□ -0.56
VPS33A-208ENST00000543633 WDFY3Q8IZQ1 3526 aa11.52□□□□□ -0.56
VPS33A-208ENST00000543633 TRAV39A0A0B4J263 110 aa11.52□□□□□ -0.56
VPS33A-208ENST00000543633 WISP2O76076 250 aa11.52□□□□□ -0.56
VPS33A-208ENST00000543633 HAND1O96004 215 aa11.52□□□□□ -0.56
VPS33A-208ENST00000543633 ZNF766Q5HY98 468 aa11.52□□□□□ -0.56
VPS33A-208ENST00000543633 FAM180AQ6UWF9 173 aa11.52□□□□□ -0.56
VPS33A-208ENST00000543633 OR2D2Q9H210 308 aa11.52□□□□□ -0.56
VPS33A-208ENST00000543633 KLF13Q9Y2Y9 288 aaPredicted RBP11.52□□□□□ -0.56
VPS33A-208ENST00000543633 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 FAM166BA8MTA8 275 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 A8MWP6 167 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 F6UZH7 168 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 CDX4O14627 284 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-208ENST00000543633 ZNHIT1O43257 154 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 SMPD2O60906 423 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 CDC34P49427 236 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-208ENST00000543633 IDH3GP51553 393 aaPredicted RBP11.52□□□□□ -0.57
VPS33A-208ENST00000543633 NUBP1P53384 320 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 PPP1CBP62140 327 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 AARDQ4LEZ3 155 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 PRR7Q8TB68 274 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 NDUFAF3Q9BU61 184 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 TP53TG5Q9Y2B4 290 aa11.52□□□□□ -0.57
VPS33A-208ENST00000543633 MPDU1O75352 247 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 TUBG1P23258 451 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 G6PCP35575 357 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 NINJ1Q92982 152 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 PCGF1Q9BSM1 259 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 PRO1933Q9H354 126 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 KCNIP2Q9NS61 270 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
VPS33A-208ENST00000543633 A0A1W2PPQ1 181 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 C21orf140B9A014 251 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 C12orf77C9JDV5 145 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 RAMP3O60896 148 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 S1PR2O95136 353 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 RAB4BP61018 213 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 RPL30P62888 115 aaKnown RBP11.5□□□□□ -0.57
VPS33A-208ENST00000543633 TRAT1Q6PIZ9 186 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 H2BFWTQ7Z2G1 175 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 NECAP1Q8NC96 275 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 HSD17B10Q99714 261 aaKnown RBP11.5□□□□□ -0.57
VPS33A-208ENST00000543633 WDR83OSQ9Y284 106 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 PRR33A8MZF0 331 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 C11orf94C9JXX5 98 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 PAGE4O60829 102 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 KRASP01116 189 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 CD59P13987 128 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 OR3A1P47881 315 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 PAX5Q02548 391 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 TFF3Q07654 80 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 P2RY6Q15077 328 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 TMEM144Q7Z5S9 345 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 OR1L1Q8NH94 360 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 MEGF10Q96KG7 1140 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 ELOVL1Q9BW60 279 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 KIAA2026Q5HYC2 2103 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
VPS33A-208ENST00000543633 MED12LQ86YW9 2145 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-208ENST00000543633 ZG16O60844 167 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 HBZP02008 142 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
VPS33A-208ENST00000543633 IQCJQ1A5X6 159 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 SPATA46Q5T0L3 261 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 LURAP1Q96LR2 239 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 HES7Q9BYE0 225 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 OR51B6Q9H340 312 aa11.49□□□□□ -0.57
VPS33A-208ENST00000543633 CDIPTO14735 213 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 TNFSF15O95150 251 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 CNN1P51911 297 aaKnown RBP11.48□□□□□ -0.57
VPS33A-208ENST00000543633 RPP30P78346 268 aaKnown RBP11.48□□□□□ -0.57
VPS33A-208ENST00000543633 RTP5Q14D33 572 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 Q3ZCU0 254 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 LINC01551Q86U37 167 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 WASF3Q9UPY6 502 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 FUT9Q9Y231 359 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 TRAV9-1A0A075B6T8 112 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 A0A1B0GV90 55 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 C17orf98A8MV24 154 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 KLRC4-KLRK1H3BQV0 150 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 IFNL4K9M1U5 179 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 PSPNO60542 156 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 MEOX1P50221 254 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 BRWD1-AS2P59051 145 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 RPL15P61313 204 aaKnown RBP11.48□□□□□ -0.57
VPS33A-208ENST00000543633 FOXL1Q12952 345 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 ZNF664Q8N3J9 261 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 Q8N7P7 452 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 MDS2Q8NDY4 140 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 UBALD1Q8TB05 177 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms