RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 Q56UQ5 140 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 OR4P4Q8NGL7 312 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 OR1K1Q8NGR3 316 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 TMEM204Q9BSN7 226 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 DUSP23Q9BVJ7 150 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 ERRFI1Q9UJM3 462 aaPredicted RBP9.63□□□□□ -0.87
CDH4-201ENST00000543233 PSG11Q9UQ72 335 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 RHBDD3Q9Y3P4 386 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 A0A1W2PP11 408 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 RAD51DO75771 328 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 TNFSF15O95150 251 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 LINC00310P59036 64 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 TAS2R46P59540 309 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 GABRA6Q16445 453 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 WDR82Q6UXN9 313 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 FAM19A2Q8N3H0 131 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 OR5B3Q8NH48 314 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 UHRF2Q96PU4 802 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 PECRQ9BY49 303 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 VSIRQ9H7M9 311 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 MRPL27Q9P0M9 148 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 FBLL1A6NHQ2 334 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 F5H5K5 113 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 C3orf79P0CE67 100 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 HIST1H1DP16402 221 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 OPRM1P35372 400 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 ROM1Q03395 351 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 PNKDQ8N490 385 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 MRPL30Q8TCC3 161 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 LHX4Q969G2 390 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 GPER1Q99527 375 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 MRPL18Q9H0U6 180 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 ZNF286AQ9HBT8 521 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 PEF1Q9UBV8 284 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 OR51B2Q9Y5P1 312 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 CACNA1GO43497 2377 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 C5orf63A6NC05 138 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 J3KRW8 73 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 PHF1O43189 567 aaPredicted RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 CCL3P10147 92 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 GPR6P46095 362 aaPredicted RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 FABP6P51161 128 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 HERV-K104P63124 156 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 LCN2P80188 198 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 TGFBR3Q03167 851 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 FAM57BQ71RH2 274 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 MRPL21Q7Z2W9 205 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 MUC15Q8N387 334 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 TMEM252Q8N6L7 170 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 SCGB1C1Q8TD33 95 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 UCN2Q96RP3 112 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 P2RX4Q99571 388 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 MRPL13Q9BYD1 178 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 PBOV1Q9GZY1 135 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 PLEKHF2Q9H8W4 249 aa9.62□□□□□ -0.87
CDH4-201ENST00000543233 NXT1Q9UKK6 140 aaKnown RBP9.62□□□□□ -0.87
CDH4-201ENST00000543233 PTPRZ1P23471 2315 aaPredicted RBP9.61□□□□□ -0.87
CDH4-201ENST00000543233 FCN1O00602 326 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 ZNHIT1O43257 154 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 FUT6P51993 359 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 CLDN15P56746 228 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
CDH4-201ENST00000543233 PLAC9Q5JTB6 97 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 GLIPR1L1Q6UWM5 242 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 MRGPRGQ86SM5 289 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 Q8N976 141 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 CLDN23Q96B33 292 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
CDH4-201ENST00000543233 ALKBH4Q9NXW9 302 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 IGLV3-12A0A075B6K2 115 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 OR6C6A6NF89 314 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 PTGDSP41222 190 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 LHFPL1Q86WI0 220 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 TMEM59Q9BXS4 323 aa9.61□□□□□ -0.87
CDH4-201ENST00000543233 C19orf25Q9UFG5 118 aaPredicted RBP9.61□□□□□ -0.87
CDH4-201ENST00000543233 RIF1Q5UIP0 2472 aaKnown RBP9.61□□□□□ -0.87
CDH4-201ENST00000543233 TMEM265A0A087WTH1 108 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 IGHG1P01857 330 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 GPX1P07203 203 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 EGR1P18146 543 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 CFPP27918 469 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 ZNF841Q6ZN19 808 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 LHFPL6Q9Y693 200 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 SVILO95425 2214 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 ZNF407Q9C0G0 2248 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 CEP250Q9BV73 2442 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.6□□□□□ -0.87
CDH4-201ENST00000543233 A0A1B0GW15 77 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 CRYM-AS1A6NIL9 109 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 HSPB2A8KAH6 182 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 ZNF732B4DXR9 585 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 IGLC1P0CG04 106 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 PSMB3P49720 205 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 ZNF90Q03938 601 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 HSPB2Q16082 182 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 PMS2CLQ68D20 193 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 SLC22A24Q8N4F4 322 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 OR10V1Q8NGI7 309 aa9.6□□□□□ -0.87
CDH4-201ENST00000543233 ARL2-SNX15V9GYD0 113 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms