RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 OR51D1Q8NGF3 324 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 OR5T2Q8NGG2 359 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 OR13D1Q8NGV5 346 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 UPRTQ96BW1 309 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 RAB3CQ96E17 227 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 C1orf147Q96MC9 270 aaPredicted RBP3.57□□□□□ -1.84
MDM2-228ENST00000542502 ZNF488Q96MN9 340 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 MS4A10Q96PG2 267 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 ABCA2Q9BZC7 2435 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 CHST6Q9GZX3 395 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 CSTL1Q9H114 145 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 ABCG5Q9H222 651 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 DCSTAMPQ9H295 470 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 NARFLQ9H6Q4 476 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 LINC00574Q9H8X3 128 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 C12orf4Q9NQ89 552 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 YAE1D1Q9NRH1 226 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 CCDC59Q9P031 241 aaKnown RBP3.57□□□□□ -1.84
MDM2-228ENST00000542502 RSL24D1Q9UHA3 163 aaKnown RBP3.57□□□□□ -1.84
MDM2-228ENST00000542502 DAPK2Q9UIK4 370 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 MAB21L2Q9Y586 359 aa3.57□□□□□ -1.84
MDM2-228ENST00000542502 KIAA2026Q5HYC2 2103 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 TRAV24A0A0B4J272 114 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 KBTBD11-OT1A0A1B0GTJ5 212 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 C17orf98A8MV24 154 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 OOSP1A8MZH6 123 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 F8VVB4 439 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 F8VWA3 439 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 SIRPB1O00241 398 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 TOR1AO14656 332 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 PHF1O43189 567 aaPredicted RBP3.56□□□□□ -1.84
MDM2-228ENST00000542502 XRCC3O43542 346 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 SLC22A5O76082 557 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 LY6G6DO95868 133 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 MT-ND4P03905 459 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 FAM157CP0CG43 387 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 DTYMKP23919 212 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 PTBP1P26599 531 aaKnown RBP eCLIP3.56□□□□□ -1.842e-8■□□□□ 10.8
MDM2-228ENST00000542502 IL3RAP26951 378 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 S100A5P33763 92 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 OR3A1P47881 315 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 UBE2E1P51965 193 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 VBP1P61758 197 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 HTD2P86397 168 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 SSBP1Q04837 148 aaKnown RBP3.56□□□□□ -1.84
MDM2-228ENST00000542502 MXD1Q05195 221 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 AESQ08117 197 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 INSL4Q14641 139 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 AANATQ16613 207 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 PIGYQ3MUY2 71 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 DMRTC1Q5HYR2 192 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 LY6G6FQ5SQ64 297 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 FAM120AOSQ5T036 256 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 HES5Q5TA89 166 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 MINOS1Q5TGZ0 78 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 Q6ZS49 121 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 KRTAP7-1Q8IUC3 87 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 GBGT1Q8N5D6 347 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 TMEM104Q8NE00 496 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 OR13A1Q8NGR1 328 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 OR10K1Q8NGX5 313 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 OR10R2Q8NGX6 335 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 ZNF596Q8TC21 504 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 ZNF418Q8TF45 676 aaPredicted RBP3.56□□□□□ -1.84
MDM2-228ENST00000542502 DEDD2Q8WXF8 326 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 BORCS5Q969J3 196 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 GALMQ96C23 342 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 ISOC1Q96CN7 298 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 SUCNR1Q9BXA5 334 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 LPAR5Q9H1C0 372 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 ATG5Q9H1Y0 275 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 PPA2Q9H2U2 334 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 DPAGT1Q9H3H5 408 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 BANF2Q9H503 90 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 RHBDL2Q9NX52 303 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 DCAF16Q9NXF7 216 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 ONECUT1Q9UBC0 465 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 CTSZQ9UBR2 303 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 NUP50Q9UKX7 468 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 TRAPPC2LQ9UL33 140 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 TBL2Q9Y4P3 447 aaKnown RBP3.56□□□□□ -1.84
MDM2-228ENST00000542502 AMMECR1Q9Y4X0 333 aaPredicted RBP3.56□□□□□ -1.84
MDM2-228ENST00000542502 MINOS1-NBL1R4GNA1 71 aa3.56□□□□□ -1.84
MDM2-228ENST00000542502 C2CD3Q4AC94 2353 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 A0A075B6Q4 140 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 BTBD17A6NE02 478 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 H3BMQ9 156 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 SULT1C2O00338 296 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 ITGB1BP1O14713 200 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 RGS5O15539 181 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 TXNL1O43396 289 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 CRLF1O75462 422 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 NAPSAO96009 420 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 PAHP00439 452 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 MELTFP08582 738 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 FBP1P09467 338 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 IGHV1-8P0DP01 117 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 HIST1H1DP16402 221 aaKnown RBP3.55□□□□□ -1.84
MDM2-228ENST00000542502 TBPP20226 339 aa3.55□□□□□ -1.84
MDM2-228ENST00000542502 ZBTB25P24278 435 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms