RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CXCL13O43927 109 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 ESDP10768 282 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 OR10J1P30954 320 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 LHX2P50458 406 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 SNU13P55769 128 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 PLP1P60201 277 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 ICAM4Q14773 271 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 CEACAM21Q3KPI0 293 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 RNF144BQ7Z419 303 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 ERASQ7Z444 233 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 PIGTQ969N2 578 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF837Q96EG3 531 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 TTTY12Q9BZ98 90 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 PBOV1Q9GZY1 135 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 SLC45A2Q9UMX9 530 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 ZFHX4Q86UP3 3567 aa6.8□□□□□ -1.32
PDLIM5-221ENST00000542407 OR5B21A6NL26 309 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 K7N7A8 449 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 RAD51DO75771 328 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 S1PR2O95136 353 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF205O95201 554 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 CD55P08174 381 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 LTC4SQ16873 150 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 C1orf100Q5SVJ3 147 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 IL22RA1Q8N6P7 574 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 PLPPR2Q96GM1 343 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 ARHGAP5-AS1Q96IT6 56 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 TRIB1Q96RU8 372 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 FKBP11Q9NYL4 201 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 GNG13Q9P2W3 67 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 PTPRBP23467 1997 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 CACNA1HO95180 2353 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 PCNX2A6NKB5 2137 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 ZFP92A6NM28 416 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 E9PLN8 166 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 GPR137BO60478 399 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 TRAPPC6AO75865 159 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 TNFSF13O75888 250 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 GATA3P23771 443 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 LMO1P25800 156 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 PPOXP50336 477 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 RSPO1Q2MKA7 263 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 GLIPR1L1Q6UWM5 242 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 PTH2Q96A98 100 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 MOB3AQ96BX8 217 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 DUX5Q96PT3 197 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF319Q9P2F9 582 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 RNF115Q9Y4L5 304 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 ASPMQ8IZT6 3477 aa6.79□□□□□ -1.32
PDLIM5-221ENST00000542407 DHHO43323 396 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 IGLV3-1P01715 115 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 AREGP15514 252 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 CD33P20138 364 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 CCL1P22362 96 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 ATP6V0CP27449 155 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 NBL1P41271 181 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 MAGEA5P43359 124 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 TLE1Q04724 770 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 VAX1Q5SQQ9 334 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 SPSB3Q6PJ21 355 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 OR2AJ1Q8NGZ0 328 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 SNIP1Q8TAD8 396 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 EMG1Q92979 244 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 PTX4Q96A99 478 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 SDSLQ96GA7 329 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 RBKSQ9H477 322 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 MOB1AQ9H8S9 216 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 A0A0A6YYD4 124 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 C5orf63A6NC05 138 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 TM4SF5O14894 197 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 SP1P08047 785 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 WT1P19544 449 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF93P35789 620 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 GABRA6Q16445 453 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 TSPO2Q5TGU0 170 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 CST9LP1Q5W188 147 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 SLC22A24Q8N4F4 322 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 TMEM251Q8N6I4 163 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 OR8B12Q8NGG6 310 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 ADAT3Q96EY9 351 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 TBX15Q96SF7 602 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 GPER1Q99527 375 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 RSG1Q9BU20 258 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 SMDT1Q9H4I9 107 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 GPR35Q9HC97 309 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 KIAA1456Q9P272 454 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 VAX2Q9UIW0 290 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 DMXL1Q9Y485 3027 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 IGKV3D-15A0A087WSY6 115 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 FAM24AA6NFZ4 105 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 CEACAM4O75871 244 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 HIST1H1DP16402 221 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 ZNF121P58317 390 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 PAFAH1B2P68402 229 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 MRPS34P82930 218 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 LYZL2Q7Z4W2 148 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms