RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 RAB21Q9UL25 225 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 IFT52Q9Y366 437 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 LHFPL6Q9Y693 200 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 U3KQV3 271 aa1.24□□□□□ -2.21
TRAV1-1-201ENST00000542354 TRAV2A0A0B4J234 112 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 hCG_38984A0A1B0GV85 526 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 NPIPB11E5RHQ5 1161 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 J3QT63 122 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 K7EMT4 169 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 HMGN4O00479 90 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 EBAG9O00559 213 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 LANCL1O43813 399 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC16A7O60669 478 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 KHDRBS3O75525 346 aaKnown RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 KDM4BO94953 1096 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CLEC3BP05452 202 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 RPA2P15927 270 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 BCL3P20749 454 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZBTB25P24278 435 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SPRP35270 261 aaPredicted RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 OPRL1P41146 370 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC15A1P46059 708 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 HAAOP46952 286 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CCR6P51684 374 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF137PP52743 207 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CRYBA2P53672 197 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 DSCR10P59022 87 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 TAS2R41P59536 307 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 NCALDP61601 193 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 RIPPLY1Q0D2K3 151 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SF3A3Q12874 501 aaKnown RBP eCLIP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 DHRS2Q13268 280 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR1Q1Q15612 314 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 KISS1Q15726 138 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC18A3Q16572 532 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 MEP1BQ16820 701 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM83EQ2M2I3 478 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SP6Q3SY56 376 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 KRBOX4Q5JUW0 171 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 C6orf141Q5SZD1 244 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 LRIF1Q5T3J3 769 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 OGFRL1Q5TC84 451 aaPredicted RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 KLC3Q6P597 504 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 TTC33Q6PID6 262 aaPredicted RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 PLET1Q6UQ28 207 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 DPPA3Q6W0C5 159 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 Q6ZRP5 223 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC25A48Q6ZT89 311 aaKnown RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 ANKRD46Q86W74 232 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 NRMQ8IXM6 262 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 BATF2Q8N1L9 274 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CLEC4FQ8N1N0 589 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CBR4Q8N4T8 237 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 RNF148Q8N7C7 305 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 FBXO36Q8NEA4 188 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 DUSP18Q8NEJ0 188 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR52M1Q8NGK5 317 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR4C15Q8NGM1 316 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 RFESDQ8TAC1 157 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 ACMSDQ8TDX5 336 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 HPSE2Q8WWQ2 592 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CYYR1Q96J86 154 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 PHB2Q99623 299 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CCT7Q99832 543 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 RNF5Q99942 180 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SULT4A1Q9BR01 284 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 RHPN1-AS1Q9BWJ2 59 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 FGF23Q9GZV9 251 aaPredicted RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 NIPAL2Q9H841 368 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF430Q9H8G1 570 aaPredicted RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 GRPEL1Q9HAV7 217 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 RRAGDQ9NQL2 400 aaPredicted RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 GPR84Q9NQS5 396 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC35D1Q9NTN3 355 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CALYQ9NYX4 217 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CALML5Q9NZT1 146 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 TXNDC16Q9P2K2 825 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 METTL1Q9UBP6 276 aaKnown RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 CLEC2DQ9UHP7 191 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SMPXQ9UHP9 88 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 TMCO1Q9UM00 188 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 SAMHD1Q9Y3Z3 626 aaKnown RBP1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 JRKLQ9Y4A0 524 aa1.23□□□□□ -2.21
TRAV1-1-201ENST00000542354 hCG_2014768A0A024R1R8 64 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 TRAV8-1A0A0A6YYK1 113 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 A0A0B4J2E0 115 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 IGHV3-35A0A0C4DH35 117 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 A0A1B0GX12 115 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 J3QRK9 145 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 XKRYO14609 159 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 CHEK1O14757 476 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 SH2D1BO14796 132 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 SMIM24O75264 130 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR2J3O76001 311 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 IGHV3-23P01764 117 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 PRH1P02810 166 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 GYPBP06028 91 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 GSTA1P08263 222 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC2A1P11166 492 aa1.22□□□□□ -2.21
TRAV1-1-201ENST00000542354 CALRP27797 417 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms