RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 NGBQ9NPG2 151 aa13.67□□□□□ -0.22
VARS2-212ENST00000542001 C17orf98A8MV24 154 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 CYB5R3P00387 301 aaPredicted RBP13.66□□□□□ -0.22
VARS2-212ENST00000542001 PSG5Q15238 335 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 INO80CQ6PI98 192 aaPredicted RBP13.66□□□□□ -0.22
VARS2-212ENST00000542001 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 RAB24Q969Q5 203 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 OBSL1O75147 1896 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 TECTAO75443 2155 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 SPNS3Q6ZMD2 512 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 NUDT16L1Q9BRJ7 211 aaKnown RBP13.66□□□□□ -0.22
VARS2-212ENST00000542001 CAMPP49913 170 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 B2MP61769 119 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 UBE2G1P62253 170 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 HIST1H3AP68431 136 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 RBPJQ06330 500 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 RSPO1Q2MKA7 263 aaPredicted RBP13.66□□□□□ -0.22
VARS2-212ENST00000542001 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 MEGF10Q96KG7 1140 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 OTOGLQ3ZCN5 2332 aa13.66□□□□□ -0.22
VARS2-212ENST00000542001 C16orf82Q7Z2V1 217 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 OR2T10Q8NGZ9 312 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 PCGF1Q9BSM1 259 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 GLRX2Q9NS18 164 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 TRAV24A0A0B4J272 114 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 COX7A2P2O60397 106 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 RAMP3O60896 148 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 ADCYAP1P18509 176 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 WNT5AP41221 380 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 PTPN13Q12923 2485 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 MRGPRGQ86SM5 289 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 RCC1LQ96I51 464 aaKnown RBP13.65□□□□□ -0.22
VARS2-212ENST00000542001 FBLN5Q9UBX5 448 aa13.65□□□□□ -0.22
VARS2-212ENST00000542001 TRAV34A0A0B4J273 112 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 CECR9P0C854 216 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 RAB4AP20338 218 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 CMTM2Q8TAZ6 248 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 SMIM8Q96KF7 97 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 ZNF331Q9NQX6 463 aaPredicted RBP13.64□□□□□ -0.23
VARS2-212ENST00000542001 CRIM1Q9NZV1 1036 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 NAT8BQ9UHF3 227 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 NTN3O00634 580 aaPredicted RBP13.64□□□□□ -0.23
VARS2-212ENST00000542001 SELLP14151 372 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 GZMHP20718 246 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 TNFRSF9Q07011 255 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 LINC00469Q8N7U9 141 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 OR13A1Q8NGR1 328 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 BTF3L4Q96K17 158 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 VSIRQ9H7M9 311 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 LY6G6EA0A0G2JKS1 128 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 RRP8O43159 456 aaKnown RBP13.64□□□□□ -0.23
VARS2-212ENST00000542001 NDUFB3O43676 98 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 FAM27E3Q08E93 113 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 MRPL54Q6P161 138 aaKnown RBP13.64□□□□□ -0.23
VARS2-212ENST00000542001 U3KQA8 63 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 DNAH14Q0VDD8 3507 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 H3BTX0 84 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 HRASP01112 189 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 IGHV1-2P23083 117 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 KHDC3LQ587J8 217 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 DDA1Q9BW61 102 aa13.64□□□□□ -0.23
VARS2-212ENST00000542001 PQLC2LA1A4F0 135 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 ODAMA1E959 279 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 CTSSP25774 331 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 CD1BP29016 333 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 CHRNB4P30926 498 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
VARS2-212ENST00000542001 HABP2Q14520 560 aaPredicted RBP13.63□□□□□ -0.23
VARS2-212ENST00000542001 TOMM20LQ6UXN7 152 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 C20orf204Q6ZNR8 217 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 OR8G5Q8NG78 346 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 HES4Q9HCC6 221 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 NAT8Q9UHE5 227 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 ANKHD1Q8IWZ3 2542 aaKnown RBP13.63□□□□□ -0.23
VARS2-212ENST00000542001 ZNF891A8MT65 544 aaPredicted RBP13.63□□□□□ -0.23
VARS2-212ENST00000542001 FCN1O00602 326 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 FAM157CP0CG43 387 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 UCP1P25874 307 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 DHRS7BQ6IAN0 325 aaPredicted RBP13.63□□□□□ -0.23
VARS2-212ENST00000542001 TMEM108Q6UXF1 575 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 OR10A7Q8NGE5 316 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 OR4S2Q8NH73 311 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 TMEM18Q96B42 140 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 NPY1RP25929 384 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 LGALS4P56470 323 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 ABLIM2Q6H8Q1 611 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 OR5B3Q8NH48 314 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 PACRGQ96M98 296 aaPredicted RBP13.63□□□□□ -0.23
VARS2-212ENST00000542001 SAP30LQ9HAJ7 183 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 PROK2Q9HC23 129 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 OR6C3Q9NZP0 311 aa13.63□□□□□ -0.23
VARS2-212ENST00000542001 TNFRSF1AP19438 455 aa13.62□□□□□ -0.23
VARS2-212ENST00000542001 ACP1P24666 158 aa13.62□□□□□ -0.23
VARS2-212ENST00000542001 RPL29P47914 159 aaKnown RBP13.62□□□□□ -0.23
VARS2-212ENST00000542001 RPL31P62899 125 aaKnown RBP13.62□□□□□ -0.23
VARS2-212ENST00000542001 SUMO1P63165 101 aaKnown RBP13.62□□□□□ -0.23
VARS2-212ENST00000542001 TFF3Q07654 80 aa13.62□□□□□ -0.23
VARS2-212ENST00000542001 FOXF2Q12947 444 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms