RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 HIKESHIQ53FT3 197 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 CXorf66Q5JRM2 361 aaPredicted RBP13.34□□□□□ -0.27
HMGA2-210ENST00000541363 CENPVQ7Z7K6 275 aaPredicted RBP13.34□□□□□ -0.27
HMGA2-210ENST00000541363 SPSB4Q96A44 273 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 XAF1Q6GPH4 301 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 GCSAMQ8N6F7 178 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 CRYGNQ8WXF5 182 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 SCGB3A1Q96QR1 104 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 CBLN4Q9NTU7 201 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 TRBV5-4A0A0C4DH59 114 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 TGFAP01135 160 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 SLC25A2Q9BXI2 301 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 TUBD1Q9UJT1 453 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 SLC25A15Q9Y619 301 aa13.34□□□□□ -0.27
HMGA2-210ENST00000541363 CD1AP06126 327 aa13.33□□□□□ -0.27
HMGA2-210ENST00000541363 RPS11P62280 158 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGA2-210ENST00000541363 NPIPB8E9PQR5 432 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 NPIPB9F8W1W9 429 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 NPIPB7O75200 414 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 SRSF6Q13247 344 aaKnown RBP13.33□□□□□ -0.28
HMGA2-210ENST00000541363 LDLRAD4O15165 306 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 F12P00748 615 aaPredicted RBP13.33□□□□□ -0.28
HMGA2-210ENST00000541363 EFNB2P52799 333 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 C3AR1Q16581 482 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 PCSK4Q6UW60 755 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 CLDN16Q9Y5I7 305 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 AKAP11Q9UKA4 1901 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 DPRXA6NFQ7 191 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 CTSVO60911 334 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 NPPCP23582 126 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 TMEM249Q2WGJ8 235 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 DMRTA1Q5VZB9 504 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 RNASEH2CQ8TDP1 164 aaKnown RBP13.33□□□□□ -0.28
HMGA2-210ENST00000541363 SDHCQ99643 169 aaPredicted RBP13.33□□□□□ -0.28
HMGA2-210ENST00000541363 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 C9JCJ5 164 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 SYNGR3O43761 229 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 CTAG1AP78358 180 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 OR51G1Q8NGK1 321 aa13.33□□□□□ -0.28
HMGA2-210ENST00000541363 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 MARS2Q96GW9 593 aaKnown RBP13.32□□□□□ -0.28
HMGA2-210ENST00000541363 KCNE1BA0A087WTH5 132 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 LIPT2A6NK58 231 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 IGKV3-20P01619 116 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 SH3BGRL3Q9H299 93 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 CHODLQ9H9P2 273 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 DOCK11Q5JSL3 2073 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 IFNL4K9M1U5 179 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 CHST5Q9GZS9 411 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 ACSF3Q4G176 576 aaPredicted RBP13.32□□□□□ -0.28
HMGA2-210ENST00000541363 DMKNQ6E0U4 476 aaPredicted RBP13.32□□□□□ -0.28
HMGA2-210ENST00000541363 C19orf24Q9BVV8 132 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 CISD1Q9NZ45 108 aaKnown RBP13.32□□□□□ -0.28
HMGA2-210ENST00000541363 HOXA3O43365 443 aaPredicted RBP13.32□□□□□ -0.28
HMGA2-210ENST00000541363 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 VGLL1Q99990 258 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 NDUFA3O95167 84 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
HMGA2-210ENST00000541363 HOGA1Q86XE5 327 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 C18orf15Q96N68 181 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 IGLV3-27P01718 113 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 MRPL32Q9BYC8 188 aaKnown RBP13.31□□□□□ -0.28
HMGA2-210ENST00000541363 SAA1P0DJI8 122 aaPredicted RBP13.31□□□□□ -0.28
HMGA2-210ENST00000541363 DUX3Q96PT4 197 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 LHX9Q9NQ69 397 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 SLC17A3O00476 420 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 ZNF646O15015 1829 aaPredicted RBP13.31□□□□□ -0.28
HMGA2-210ENST00000541363 VKORC1L1Q8N0U8 176 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 LRP6O75581 1613 aa13.31□□□□□ -0.28
HMGA2-210ENST00000541363 PRSS53Q2L4Q9 553 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 SCN1AP35498 2009 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 C21orf140B9A014 251 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 ASIPP42127 132 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 FOXI3A8MTJ6 420 aaPredicted RBP13.3□□□□□ -0.28
HMGA2-210ENST00000541363 IGHV3-72A0A0B4J1Y9 119 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 A0A1W2PQD3 144 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 SSC4DQ8WTU2 575 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 YAE1D1Q9NRH1 226 aa13.3□□□□□ -0.28
HMGA2-210ENST00000541363 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
HMGA2-210ENST00000541363 TMEM196Q5HYL7 178 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 PMS2CLQ68D20 193 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 MRPL20Q9BYC9 149 aaKnown RBP13.29□□□□□ -0.28
HMGA2-210ENST00000541363 TNFRSF12AQ9NP84 129 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 HYAL3O43820 417 aaPredicted RBP13.29□□□□□ -0.28
HMGA2-210ENST00000541363 RUNX1Q01196 453 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 MIC13Q5XKP0 118 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 KLK2P20151 261 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 C1orf185Q5T7R7 199 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 TAF15Q92804 592 aaKnown RBP eCLIP13.29□□□□□ -0.284e-6■■□□□ 12.8
HMGA2-210ENST00000541363 CCL13Q99616 98 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 CRPP02741 224 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 FBXW9Q5XUX1 488 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms