RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 METTL15A6NJ78 407 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 PPP5D1E7EU14 171 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 FKBP6O75344 327 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 C8orf88P0DMB2 117 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 PIGYQ3MUY2 71 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 ZNF585BQ52M93 769 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 SPATA24Q86W54 205 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 PDPNQ86YL7 162 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 BBS1Q8NFJ9 593 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 TNFAIP8L1Q8WVP5 186 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 GALMQ96C23 342 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 DGCR14Q96DF8 476 aaKnown RBP6.85□□□□□ -1.31
YBX3-211ENST00000541351 NSL1Q96IY1 281 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 NSMCE2Q96MF7 247 aa6.85□□□□□ -1.31
YBX3-211ENST00000541351 GMPR2Q9P2T1 348 aaKnown RBP6.85□□□□□ -1.31
YBX3-211ENST00000541351 SAMHD1Q9Y3Z3 626 aaKnown RBP6.85□□□□□ -1.31
YBX3-211ENST00000541351 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 TRBV9A0A0B4J1U6 114 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 IGHV4-28A0A0C4DH34 117 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 C15orf61A6NNL5 157 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 H3BNX3 289 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 CREBL2O60519 120 aaPredicted RBP6.84□□□□□ -1.31
YBX3-211ENST00000541351 ZNF780AO75290 641 aaPredicted RBP6.84□□□□□ -1.31
YBX3-211ENST00000541351 CIB2O75838 187 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 ISG15P05161 165 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 CT45A6P0DMU7 189 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 CT45A5P0DMU8 189 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 CT45A7P0DMV0 189 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 PPP1CCP36873 323 aaKnown RBP6.84□□□□□ -1.31
YBX3-211ENST00000541351 RBM11P57052 281 aaKnown RBP6.84□□□□□ -1.31
YBX3-211ENST00000541351 C8orf82Q6P1X6 216 aaPredicted RBP6.84□□□□□ -1.31
YBX3-211ENST00000541351 OR13C3Q8NGS6 347 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 OR52N1Q8NH53 320 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 NRG4Q8WWG1 115 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 FAM46BQ96A09 425 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 METTL9Q9H1A3 318 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 ZNF556Q9HAH1 456 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 TAF9BQ9HBM6 251 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 SMPD3Q9NY59 655 aaPredicted RBP6.84□□□□□ -1.31
YBX3-211ENST00000541351 ABRACLQ9P1F3 81 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 GMPPBQ9Y5P6 360 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 SELENOKQ9Y6D0 94 aa6.84□□□□□ -1.31
YBX3-211ENST00000541351 GYG2O15488 501 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 ACTL6BO94805 426 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 DHFRP00374 187 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 HLA-AP01891 365 aaKnown RBP6.83□□□□□ -1.32
YBX3-211ENST00000541351 MAS1P04201 325 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 EDN2P20800 178 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 DNAL1Q4LDG9 190 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 HACD2Q6Y1H2 254 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 ZDHHC13Q8IUH4 622 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 OR10G2Q8NGC3 310 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 OR4K15Q8NH41 348 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 SPIN2AQ99865 258 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 SPIN2BQ9BPZ2 258 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 ATG101Q9BSB4 218 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 ABCD2Q9UBJ2 740 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 AGRNO00468 2067 aa6.83□□□□□ -1.32
YBX3-211ENST00000541351 NBDYA0A0U1RRE5 68 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
YBX3-211ENST00000541351 B2RBV5 119 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 GEMIN2O14893 280 aaKnown RBP6.82□□□□□ -1.32
YBX3-211ENST00000541351 MAGEB4O15481 346 aaPredicted RBP6.82□□□□□ -1.32
YBX3-211ENST00000541351 GPX5O75715 221 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
YBX3-211ENST00000541351 RPL5P46777 297 aaKnown RBP6.82□□□□□ -1.32
YBX3-211ENST00000541351 ZNF529Q6P280 563 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 GLDNQ6ZMI3 551 aaPredicted RBP6.82□□□□□ -1.32
YBX3-211ENST00000541351 C5orf24Q7Z6I8 188 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 APRG1Q8IVJ8 170 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 OR52L2PQ8NGH6 319 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 OR51A2Q8NGJ7 313 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 EDARADDQ8WWZ3 215 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 EEF1AKMT3Q96AZ1 226 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 C17orf77Q96MU5 243 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 NIPSNAP1Q9BPW8 284 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 CHRDL1Q9BU40 450 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 IFI27L2Q9H2X8 130 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 Q9H521 79 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 IL36GQ9NZH8 169 aa6.82□□□□□ -1.32
YBX3-211ENST00000541351 DNAH5Q8TE73 4624 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 TEX48A0A1B0GUV7 120 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 CCDC182A6NF36 153 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 FAM90A7PA6NKC0 464 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 EREGO14944 169 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 OR2J3O76001 311 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 HNRNPCP07910 306 aaKnown RBP eCLIP6.81□□□□□ -1.324e-7■□□□□ 9.3
YBX3-211ENST00000541351 OR2T7P0C7T2 308 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 APELAP0DMC3 54 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 OSMP13725 252 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 GTF2F2P13984 249 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 ADARB1P78563 741 aaKnown RBP6.81□□□□□ -1.32
YBX3-211ENST00000541351 CDK5Q00535 292 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 TAGLNQ01995 201 aaKnown RBP6.81□□□□□ -1.32
YBX3-211ENST00000541351 GPR176Q14439 515 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 GNMTQ14749 295 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 FAM98BQ52LJ0 330 aaKnown RBP6.81□□□□□ -1.32
YBX3-211ENST00000541351 DMKNQ6E0U4 476 aaPredicted RBP6.81□□□□□ -1.32
YBX3-211ENST00000541351 CLEC19AQ6UXS0 136 aa6.81□□□□□ -1.32
YBX3-211ENST00000541351 IZUMO2Q6UXV1 221 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms