RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 C1RLQ9NZP8 487 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 GCHFRP30047 84 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 JOSD1Q15040 202 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF488Q96MN9 340 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 RTBDNQ9BSG5 229 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 MAP1LC3AQ9H492 121 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 TRPM6Q9BX84 2022 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 CBLN1P23435 193 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 PRDX2P32119 198 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 DLL3Q9NYJ7 618 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 CLDN16Q9Y5I7 305 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 COX7A1P24310 79 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 NUBP1P53384 320 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 HSPE1P61604 102 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 IGLV3-21P80748 117 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 NR2C2APQ86WQ0 139 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 CCL17Q92583 94 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 HSPB7Q9UBY9 170 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 A0A0J9YW62 118 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 A1L4Q6 167 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 TMEM229AB2RXF0 380 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 TMPRSS2O15393 492 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 C4orf51C9J302 202 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 K7N7A8 449 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 COX5BP10606 129 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 CRYBB3P26998 211 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 KCNMB1Q16558 191 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 TMEM177Q53S58 311 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 PRDM14Q9GZV8 571 aa12.86□□□□□ -0.35
SMARCA4-207ENST00000541122 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 FXYD3Q14802 87 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 RIPPLY2Q5TAB7 128 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 SPANXN1Q5VSR9 72 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 CYB5R2Q6BCY4 276 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 SFTPA1Q8IWL2 248 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 TBL2Q9Y4P3 447 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 PGPA6NDG6 321 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 ZG16O60844 167 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 UCP1P25874 307 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 HBBP68871 147 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 ASPHD2Q6ICH7 369 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 MDP1Q86V88 176 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 KCNS1Q96KK3 526 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNFX1Q9P2E3 1918 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 LOC107984156A0A0G2JMH3 177 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 KIAA1644Q3SXP7 199 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF788Q6ZQV5 615 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 ARL17AQ8IVW1 177 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 OR1N2Q8NGR9 330 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 OR8B2Q96RD0 313 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 CCDC88CQ9P219 2028 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 C1orf53Q5VUE5 145 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 LURAP1LQ8IV03 231 aa12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-207ENST00000541122 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 RAMP1O60894 148 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 TMEM30BQ3MIR4 351 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HEPN1Q6WQI6 88 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 ALKBH7Q9BT30 221 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 TMSB15BA0A087X1C1 80 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 CENPWQ5EE01 88 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 CLEC5AQ9NY25 188 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 TCFL5Q9UL49 500 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 SOX21Q9Y651 276 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 IGFBP3P17936 291 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 MC5RP33032 325 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 ARF6P62330 175 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 COLCA2A8K830 154 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 GREM1O60565 184 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BKO60814 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BJP06899 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BOP23527 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BBP33778 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BDP58876 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BCP62807 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST2H2BEQ16778 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 TTC32Q5I0X7 151 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 KHDC1LQ5JSQ8 128 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF841Q6ZN19 808 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BHQ93079 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BNQ99877 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 HIST1H2BMQ99879 126 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 REG4Q9BYZ8 158 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 LAMTOR2Q9Y2Q5 125 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 WNK3Q9BYP7 1800 aa12.84□□□□□ -0.35
SMARCA4-207ENST00000541122 C10orf128Q5T292 105 aa12.83□□□□□ -0.35
SMARCA4-207ENST00000541122 GATAD1Q8WUU5 269 aa12.83□□□□□ -0.35
SMARCA4-207ENST00000541122 CD5P06127 495 aa12.83□□□□□ -0.36
SMARCA4-207ENST00000541122 MGPP08493 103 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms