RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 LINC00312Q9Y6C7 94 aa10.26□□□□□ -0.77
SMAD3-204ENST00000540846 MALRD1Q5VYJ5 2156 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 hADV38S2A0JD32 116 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 TAAR5O14804 337 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 NDUFA2O43678 99 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 NMBP08949 121 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 TPT1P13693 172 aaKnown RBP10.25□□□□□ -0.77
SMAD3-204ENST00000540846 GPR6P46095 362 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-204ENST00000540846 P2RY1P47900 373 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 RPL30P62888 115 aaKnown RBP10.25□□□□□ -0.77
SMAD3-204ENST00000540846 Q3ZCU0 254 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 GPR157Q5UAW9 335 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 GPR146Q96CH1 333 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 TIMD4Q96H15 378 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 IFI27L2Q9H2X8 130 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 TAS2R3Q9NYW6 316 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 CCDC168Q8NDH2 2452 aa10.25□□□□□ -0.77
SMAD3-204ENST00000540846 YLPM1P49750 1951 aaKnown RBP10.24□□□□□ -0.77
SMAD3-204ENST00000540846 FLNBO75369 2602 aaKnown RBP10.24□□□□□ -0.77
SMAD3-204ENST00000540846 IGHV4-30-2A0A087WSY4 118 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 A0A096LNT2 108 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 NDUFS8O00217 210 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 GPR137BO60478 399 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 GAPDHP04406 335 aaKnown RBP10.24□□□□□ -0.77
SMAD3-204ENST00000540846 MMP9P14780 707 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 NDUFB7P17568 137 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 OMGP23515 440 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 GPR12P47775 334 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 RAB7AP51149 207 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 AKR1C2P52895 323 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 ID3Q02535 119 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-204ENST00000540846 RNASE11Q8TAA1 199 aaKnown RBP10.24□□□□□ -0.77
SMAD3-204ENST00000540846 FAM168AQ92567 244 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 ZC4H2Q9NQZ6 224 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 IDI2-AS1Q9NZ38 188 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 LPAR3Q9UBY5 353 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 ITPR3Q14573 2671 aa10.24□□□□□ -0.77
SMAD3-204ENST00000540846 CR1P17927 2039 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 RAMP3O60896 148 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 P0C879 139 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 PVALBP20472 110 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-204ENST00000540846 LPAR6P43657 344 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 BRWD1-AS2P59051 145 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 LMO4P61968 165 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 POLR2GP62487 172 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMAD3-204ENST00000540846 CLEC2AQ6UVW9 174 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 BTNL3Q6UXE8 466 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 BAP18Q8IXM2 172 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF439Q8NDP4 499 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 OR10A7Q8NGE5 316 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 TCTEX1D2Q8WW35 142 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 ABHD14AQ9BUJ0 271 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 SLC25A32Q9H2D1 315 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 PATZ1Q9HBE1 687 aaKnown RBP10.23□□□□□ -0.77
SMAD3-204ENST00000540846 COA4Q9NYJ1 87 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 FBXL17Q9UF56 701 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
SMAD3-204ENST00000540846 GAB2Q9UQC2 676 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 ARHGAP32A7KAX9 2087 aa10.23□□□□□ -0.77
SMAD3-204ENST00000540846 LINC00473A8K010 186 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 C17orf98A8MV24 154 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 KIAA1324LA8MWY0 1029 aaPredicted RBP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 DVL1O14640 695 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 NDUFB3O43676 98 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 SSSCA1O60232 199 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 ATG12O94817 140 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 IGHV2-5P01817 119 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 EPHA1P21709 976 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 DUTP33316 252 aaKnown RBP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF134P52741 427 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 RPL31P62899 125 aaKnown RBP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 EIF5AP63241 154 aaKnown RBP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 LRRC10Q5BKY1 277 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 Q6ZRM9 215 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 CLDND2Q8NHS1 167 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 PCNPQ8WW12 178 aaKnown RBP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 GAL3ST2Q9H3Q3 398 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 C19orf12Q9NSK7 152 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 MED9Q9NWA0 146 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 CACNG5Q9UF02 275 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 MMP24Q9Y5R2 645 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 MED13LQ71F56 2210 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 IGHV4-61A0A0C4DH41 118 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 LEUTXA8MZ59 168 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 SLC31A2O15432 143 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 RBFOX2O43251 390 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 PROP1O75360 226 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 S1PR2O95136 353 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 RRASP10301 218 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 DSCR9P59020 149 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 ZNF273Q14593 569 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 CLEC12BQ2HXU8 276 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 CT45A1Q5HYN5 189 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 OR2B11Q5JQS5 317 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 UTF1Q5T230 341 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 OR2C3Q8N628 320 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 CT45A3Q8NHU0 189 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms