RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TCL1AP56279 114 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 MYL6P60660 151 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 C1QTNF8P60827 252 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 RPL26P61254 145 aaKnown RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 DAD1P61803 113 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 HPCAP84074 193 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 RELAQ04206 551 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 MLLT11Q13015 90 aaPredicted RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 MED21Q13503 144 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 UAP1Q16222 522 aaPredicted RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 TRMT12Q53H54 448 aaKnown RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 SPATA31B1PQ5VZV4 182 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 LPCAT4Q643R3 524 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 EBLN2Q6P2I7 272 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 DNM1P34Q6PK57 102 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 AGTRAPQ6RW13 159 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 RASSF6Q6ZTQ3 369 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 HIST2H3AQ71DI3 136 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 ATP5L2Q7Z4Y8 100 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 NAA40Q86UY6 237 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 COMMD7Q86VX2 200 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 Q8N402 240 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 NATD1Q8N6N6 113 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 ZNF283Q8N7M2 679 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 CCDC112Q8NEF3 446 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 OR11H1Q8NG94 326 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 OR52E4Q8NGH9 312 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 PIGXQ8TBF5 258 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 TNFAIP8L1Q8WVP5 186 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 ITFG2Q969R8 447 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 TLCD1Q96CP7 247 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 SMIM19Q96E16 107 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 ABHD14BQ96IU4 210 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 DHRS9Q9BPW9 319 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 MED18Q9BUE0 208 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 SPZ1Q9BXG8 430 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 CDCA4Q9BXL8 241 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 EIF5A2Q9GZV4 153 aaKnown RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 MS4A6AQ9H2W1 248 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 MAP1LC3AQ9H492 121 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 RPL26L1Q9UNX3 145 aaKnown RBP0.83□□□□□ -2.28
MDM2-227ENST00000540709 HDGFL3Q9Y3E1 203 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 RAD50Q92878 1312 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 RAB3GAP2Q9H2M9 1393 aa0.83□□□□□ -2.28
MDM2-227ENST00000540709 DENND4BO75064 1496 aaPredicted RBP0.82□□□□□ -2.28
MDM2-227ENST00000540709 IGHV3-15A0A0B4J1V0 119 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TMEM235A6NFC5 223 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 GOLGA6L19H0YKK7 550 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 COPEO14579 308 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 MRASO14807 208 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TGOLN2O43493 480 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 LY6HO94772 140 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 S100A6P06703 90 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 CTSEP14091 401 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 CXCL2P19875 107 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 CXCL3P19876 107 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 ATP6V0CP27449 155 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 OR1E2P47887 323 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 CEBPGP53567 150 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 AP2S1P53680 142 aaPredicted RBP0.82□□□□□ -2.28
MDM2-227ENST00000540709 SNAP25P60880 206 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 UBE2IP63279 158 aaKnown RBP0.82□□□□□ -2.28
MDM2-227ENST00000540709 BSPH1Q075Z2 132 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 JOSD1Q15040 202 aaPredicted RBP0.82□□□□□ -2.28
MDM2-227ENST00000540709 RSU1Q15404 277 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 SLC36A2Q495M3 483 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 MRPL51Q4U2R6 128 aaKnown RBP0.82□□□□□ -2.28
MDM2-227ENST00000540709 MESTQ5EB52 335 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 CLVS2Q5SYC1 327 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 HIST2H3PS2Q5TEC6 136 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 LGALS9CQ6DKI2 356 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 C8orf74Q6P047 294 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TNFAIP8L2Q6P589 184 aaPredicted RBP0.82□□□□□ -2.28
MDM2-227ENST00000540709 SCGB1D4Q6XE38 83 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TMEM75Q8N9X5 138 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 OR10D3Q8NH80 312 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 SLC37A2Q8TED4 501 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 RNF133Q8WVZ7 376 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 RAB8BQ92930 207 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TAMM41Q96BW9 452 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 UPK3BQ9BT76 320 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TMEM109Q9BVC6 243 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 PECRQ9BY49 303 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 SLC22A4Q9H015 551 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 GTSF1LQ9H1H1 148 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 FAM96AQ9H5X1 160 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 DKKL1Q9UK85 242 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TP53TG1Q9Y2A0 90 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 KDM5BQ9UGL1 1544 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 EVC2Q86UK5 1308 aa0.82□□□□□ -2.28
MDM2-227ENST00000540709 TRAV8-1A0A0A6YYK1 113 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 TEX50A0A1B0GTY4 177 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 C5orf49A4QMS7 147 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 LINC00862A6NCI5 91 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 C2orf74A8MZ97 194 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 M0R036 132 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 CXCR6O00574 342 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 UBE2L6O14933 153 aa0.81□□□□□ -2.28
MDM2-227ENST00000540709 GSTZ1O43708 216 aaPredicted RBP0.81□□□□□ -2.28
MDM2-227ENST00000540709 ATP5HO75947 161 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms