RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 NAPSAO96009 420 aa8.34□□□□□ -1.07
PHC1-208ENST00000540574 TNFAIP6P98066 277 aaPredicted RBP8.34□□□□□ -1.07
PHC1-208ENST00000540574 RAB31Q13636 194 aa8.34□□□□□ -1.07
PHC1-208ENST00000540574 PLGLAQ15195 96 aa8.34□□□□□ -1.07
PHC1-208ENST00000540574 ZNF66Q6ZN08 573 aa8.34□□□□□ -1.07
PHC1-208ENST00000540574 OR8G5Q8NG78 346 aa8.34□□□□□ -1.07
PHC1-208ENST00000540574 SSC4DQ8WTU2 575 aa8.34□□□□□ -1.07
PHC1-208ENST00000540574 MIOXQ9UGB7 285 aa8.34□□□□□ -1.07
PHC1-208ENST00000540574 CEACAM18A8MTB9 384 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 ZNF705FA8MVS1 300 aaPredicted RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 GYPAP02724 150 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 ZNF705DP0CH99 300 aaPredicted RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 ZNF705BP0CI00 300 aaPredicted RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 RNF212Q495C1 297 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 GATAD1Q8WUU5 269 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 TAF15Q92804 592 aaKnown RBP eCLIP8.33□□□□□ -1.08
PHC1-208ENST00000540574 IGKV3D-15A0A087WSY6 115 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 IGHV3-21A0A0B4J1V1 117 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 CLDN34H7C241 214 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 PHOX2AO14813 284 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 ERVFRD-1P60508 538 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 RPL30P62888 115 aaKnown RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 TNFRSF9Q07011 255 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 TFF3Q07654 80 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 H1FOOQ8IZA3 346 aaPredicted RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 RCC1LQ96I51 464 aaKnown RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 TOLLIPQ9H0E2 274 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 WIPI2Q9Y4P8 454 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 A0A1W2PRD5 423 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 A0A1W2PRF3 423 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 A0A1W2PRM7 423 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 ZNF320A2RRD8 509 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 MARCH11A6NNE9 402 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 AP4M1O00189 453 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 PRRG2O14669 202 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 FABP1P07148 127 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 CDC34P49427 236 aaPredicted RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 GNB1P62873 340 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 Q6ZT83 130 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 RPRMLQ8N4K4 120 aa8.33□□□□□ -1.08
PHC1-208ENST00000540574 GAR1Q9NY12 217 aaKnown RBP8.33□□□□□ -1.08
PHC1-208ENST00000540574 IGHV3-72A0A0B4J1Y9 119 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FOXI3A8MTJ6 420 aaPredicted RBP8.32□□□□□ -1.08
PHC1-208ENST00000540574 CD5P06127 495 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 COX5BP10606 129 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
PHC1-208ENST00000540574 S100A12P80511 92 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 ID3Q02535 119 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 ARL16Q0P5N6 197 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 GCSAMLQ5JQS6 135 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 ZNF324BQ6AW86 544 aaPredicted RBP8.32□□□□□ -1.08
PHC1-208ENST00000540574 Q6ZPA2 131 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 TMEM56Q96MV1 263 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 ZNF251Q9BRH9 671 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 GPR61Q9BZJ8 451 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 PKIBQ9C010 78 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 TMEM56-RWDD3S4R434 201 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 TRGV10A0A0A0MS01 117 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A10PA6NDY2 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 BTBD17A6NE02 478 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A18PA6NE21 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A16PA6NEW6 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A20PA6NIJ5 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A8PA6NJQ4 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A7PA6NKC0 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A22PA8MWA6 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A12PA8MX19 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A5PA8MXJ8 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 VSTM5A8MXK1 200 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A23PA8MXZ1 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A15PP0C7V4 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A13PP0C7W8 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A14PP0C7W9 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 FAM90A24PP0C7X0 464 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 PRB4P10163 310 aaPredicted RBP8.32□□□□□ -1.08
PHC1-208ENST00000540574 BCL2P10415 239 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 MZT1Q08AG7 82 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 GABRA6Q16445 453 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 SPSB4Q96A44 273 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 TAAR6Q96RI8 345 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 TRGV8A0A0C4DH27 118 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 MDFIC2A0A1B0GVS7 189 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 COLCA2A8K830 154 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 K7N7A8 449 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 RPS23P62266 143 aaKnown RBP8.32□□□□□ -1.08
PHC1-208ENST00000540574 BSXQ3C1V8 233 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 ACOT6Q3I5F7 207 aaPredicted RBP8.32□□□□□ -1.08
PHC1-208ENST00000540574 TMEM41BQ5BJD5 291 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 PCSK4Q6UW60 755 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 WDR86Q86TI4 376 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 OR10X1Q8NGY0 326 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 QTRT1Q9BXR0 403 aaKnown RBP8.32□□□□□ -1.08
PHC1-208ENST00000540574 PLSCR2Q9NRY7 297 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 ANAPC10Q9UM13 185 aa8.32□□□□□ -1.08
PHC1-208ENST00000540574 C11orf94C9JXX5 98 aa8.31□□□□□ -1.08
PHC1-208ENST00000540574 THBS3P49746 956 aa8.31□□□□□ -1.08
PHC1-208ENST00000540574 RPP30P78346 268 aaKnown RBP8.31□□□□□ -1.08
PHC1-208ENST00000540574 SLC35B1P78383 322 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms