RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 OR10G9Q8NGN4 311 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 OR10G7Q8NGN6 311 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 RNASE8Q8TDE3 154 aaKnown RBP5.24□□□□□ -1.57
PTPRD-214ENST00000540109 ERGIC1Q969X5 290 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TMEM106BQ9NUM4 274 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 GPR132Q9UNW8 380 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 LY96Q9Y6Y9 160 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 PPIAL4DF5H284 164 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 H0Y980 276 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 RELBQ01201 579 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 EWSR1Q01844 656 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRD-214ENST00000540109 ROM1Q03395 351 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 CD226Q15762 336 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TM4SF20Q53R12 229 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TMEM136Q6ZRR5 245 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 PERPQ96FX8 193 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 C1orf43Q9BWL3 253 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 GEMIN7Q9H840 131 aaKnown RBP5.24□□□□□ -1.57
PTPRD-214ENST00000540109 PLA2G3Q9NZ20 509 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 COX11Q9Y6N1 276 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 PRSS37A4D1T9 235 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 A8MWL6 223 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF732B4DXR9 585 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 FTH1P19P0C7X4 201 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 GZMBP10144 247 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 BCL3P20749 454 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 EDDM3BP56851 147 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 LINC01590Q5TEZ4 76 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 Q6AWC8 147 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TEX29Q8N6K0 151 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 AGBL5Q8NDL9 886 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 SAP25Q8TEE9 199 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 PIGCQ92535 297 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 CDX2Q99626 313 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-214ENST00000540109 ERRFI1Q9UJM3 462 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-214ENST00000540109 DOCK9Q9BZ29 2069 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 CACNA1GO43497 2377 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 H3BML4 177 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 LAMTOR5O43504 91 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 NTN1O95631 604 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 HIST1H1AQ02539 215 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TMEM45BQ96B21 275 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 COMMD5Q9GZQ3 224 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TMEM140Q9NV12 185 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 PILRBQ9UKJ0 227 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 HRKO00198 91 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 ADCYAP1P18509 176 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 HERV-K104P63124 156 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TWIST1Q15672 202 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 C20orf196Q8IYI0 205 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 GBGT1Q8N5D6 347 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 OR10V1Q8NGI7 309 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 OR51E1Q8TCB6 317 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 RBM24Q9BX46 236 aaKnown RBP5.24□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF665Q9H7R5 613 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 YAE1D1Q9NRH1 226 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 SLC7A10Q9NS82 523 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 SYNGR2O43760 224 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 SMIM13P0DJ93 91 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 SELENOTP62341 195 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 RTP5Q14D33 572 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 PQLC2Q6ZP29 291 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF519Q8TB69 540 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF418Q8TF45 676 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-214ENST00000540109 WDYHV1Q96HA8 205 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ATXN7O15265 892 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-214ENST00000540109 REG1AP05451 166 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 UMODP07911 640 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 PAX2Q02962 417 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 C10orf91Q5T1B1 145 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 TEX38Q6PEX7 206 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 SFTPA2Q8IWL1 248 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 NFAM1Q8NET5 270 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-214ENST00000540109 RHBDD1Q8TEB9 315 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ATP6V0BQ99437 205 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 HDGFL3Q9Y3E1 203 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ARHGEF17Q96PE2 2063 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-214ENST00000540109 TRAV9-2A0A087WT02 112 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 LOC102723996A0A087X1L8 192 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 MPZL1O95297 269 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 PTGER4P35408 488 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ARHGAP5-AS1Q96IT6 56 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 HARBI1Q96MB7 349 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 DEFB126Q9BYW3 111 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 SMPXQ9UHP9 88 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF205O95201 554 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 C1QTNF9P0C862 333 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 BTCP35070 178 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF766Q5HY98 468 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 HES3Q5TGS1 186 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 DEFB119Q8N690 84 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 OR4S2Q8NH73 311 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 SPACA9Q96E40 222 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF385AQ96PM9 386 aaKnown RBP5.23□□□□□ -1.57
PTPRD-214ENST00000540109 B9D1Q9UPM9 204 aa5.23□□□□□ -1.57
PTPRD-214ENST00000540109 TRAV14DV4A0A0A6YYC5 116 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms