RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 C11orf54Q9H0W9 315 aaPredicted RBP11.72□□□□□ -0.53
USB1-203ENST00000539737 CCDC59Q9P031 241 aaKnown RBP11.72□□□□□ -0.53
USB1-203ENST00000539737 ZNF221Q9UK13 617 aa11.72□□□□□ -0.53
USB1-203ENST00000539737 CSMD3Q7Z407 3707 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 SMIM31A0A1B0GVY4 71 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 MOSP00540 346 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 EIF4EP06730 217 aaKnown RBP11.71□□□□□ -0.53
USB1-203ENST00000539737 ECI1P42126 302 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 GPR12P47775 334 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 OR3A3P47888 321 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 CNIH2Q6PI25 160 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.71□□□□□ -0.53
USB1-203ENST00000539737 OR8H1Q8NGG4 311 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 ISOC1Q96CN7 298 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 RASL11BQ9BPW5 248 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 AGMATQ9BSE5 352 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 MRPL20Q9BYC9 149 aaKnown RBP11.71□□□□□ -0.53
USB1-203ENST00000539737 IFT46Q9NQC8 304 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 ANXA10Q9UJ72 324 aa11.71□□□□□ -0.53
USB1-203ENST00000539737 HYDINQ4G0P3 5121 aa11.71□□□□□ -0.54
USB1-203ENST00000539737 IGKV1D-8A0A087WSZ0 117 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 H3BMQ9 156 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 HPGDSO60760 199 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 SLC6A1P30531 599 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 ARPC4P59998 168 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 HOGA1Q86XE5 327 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 H1FOOQ8IZA3 346 aaPredicted RBP11.7□□□□□ -0.54
USB1-203ENST00000539737 BEST4Q8NFU0 473 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 ABHD14BQ96IU4 210 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 EAF1Q96JC9 268 aaPredicted RBP11.7□□□□□ -0.54
USB1-203ENST00000539737 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 ZFP57Q9NU63 452 aa11.7□□□□□ -0.54
USB1-203ENST00000539737 OR5H14A6NHG9 310 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 FAM25AB3EWG3 89 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 FAM25CB3EWG5 89 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 FAM25GB3EWG6 89 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 AP4M1O00189 453 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
USB1-203ENST00000539737 RPL39P5Q59GN2 51 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 CASC10Q5T4H9 136 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 Q8N6K4 173 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 OR2D2Q9H210 308 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 LIN7CQ9NUP9 197 aaKnown RBP11.69□□□□□ -0.54
USB1-203ENST00000539737 ADAM30Q9UKF2 790 aa11.69□□□□□ -0.54
USB1-203ENST00000539737 RBM7Q9Y580 266 aaKnown RBP11.69□□□□□ -0.54
USB1-203ENST00000539737 CCDC160A6NGH7 325 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 CCL24O00175 119 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 IGHG2P01859 326 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 OR8U9P0C7N5 309 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 ELK1P19419 428 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 PRSS3P35030 304 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 MYCNOSP40205 109 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 ZFAND6Q6FIF0 208 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 TEX38Q6PEX7 206 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 ZNF695Q8IW36 515 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 OR8U1Q8NH10 309 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 DYNC2LI1Q8TCX1 351 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 MCRIP2Q9BUT9 160 aaKnown RBP11.68□□□□□ -0.54
USB1-203ENST00000539737 SCPEP1Q9HB40 452 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 ZMAT5Q9UDW3 170 aaKnown RBP11.68□□□□□ -0.54
USB1-203ENST00000539737 RNF150Q9ULK6 438 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 CEPT1Q9Y6K0 416 aa11.68□□□□□ -0.54
USB1-203ENST00000539737 ZNF736B4DX44 427 aaPredicted RBP11.67□□□□□ -0.54
USB1-203ENST00000539737 C3orf84H3BNL1 204 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 TPPPO94811 219 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
USB1-203ENST00000539737 PTHLHP12272 177 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 MC5RP33032 325 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 CXorf66Q5JRM2 361 aaPredicted RBP11.67□□□□□ -0.54
USB1-203ENST00000539737 FAM131AQ6UXB0 335 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 OVCH2Q7RTZ1 564 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 STPG2Q8N412 459 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 MUC7Q8TAX7 377 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 C15orf40Q8WUR7 153 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 EXTL2Q9UBQ6 330 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 ANAPC10Q9UM13 185 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 GAB2Q9UQC2 676 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 WASHC3Q9Y3C0 194 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 OR2W1Q9Y3N9 320 aa11.67□□□□□ -0.54
USB1-203ENST00000539737 MEIS3P1A6NDR6 274 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 H0YJW9 148 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 M0R1X1 148 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 RGS5O15539 181 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 RBBP9O75884 186 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 SLC22A5O76082 557 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 APOA2P02652 100 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 CT45A6P0DMU7 189 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 CT45A5P0DMU8 189 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 CT45A7P0DMV0 189 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 VDAC1P21796 283 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 NFYAP23511 347 aaPredicted RBP11.66□□□□□ -0.54
USB1-203ENST00000539737 TAS2R46P59540 309 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 MMDQ15546 238 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 SNX29P2Q8IUI4 249 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 OR5AP2Q8NGF4 316 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 OR5AN1Q8NGI8 311 aa11.66□□□□□ -0.54
USB1-203ENST00000539737 SNAPC3Q92966 411 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms