RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FNDC1Q4ZHG4 1894 aaPredicted RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 HSPB1P04792 205 aaKnown RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 VSIG10L2P0DP72 767 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 PDLIM4P50479 330 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 RRN3P1Q2M238 152 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TM4SF20Q53R12 229 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 BPIFA4PQ86YQ2 179 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 LRRC75AQ8NAA5 344 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 OR8A1Q8NGG7 326 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 PRO1933Q9H354 126 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 LPAR2Q9HBW0 351 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 ABCA7Q8IZY2 2146 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TRAV39A0A0B4J263 110 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 NPIPB6E9PJ23 425 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 J3QW42 95 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 PCOLCEQ15113 449 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 MS4A3Q96HJ5 214 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 CALYQ9NYX4 217 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TUBD1Q9UJT1 453 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM238LA0A1B0GVL6 79 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 A6NJY4 79 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 SPINK2P20155 84 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 SUCLG1P53597 346 aaKnown RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 UBE2V2Q15819 145 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 PQLC2Q6ZP29 291 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 SELENOHQ8IZQ5 122 aaKnown RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 FGFRL1Q8N441 504 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TAF15Q92804 592 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 M0R3E3 92 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 NKX2-8O15522 239 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 GREM1O60565 184 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 NSUN5P2Q63ZY6 315 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 CD200R1LQ6Q8B3 271 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM252Q8N6L7 170 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF738Q8NE65 137 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF430Q9H8G1 570 aaPredicted RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 IL36RNQ9UBH0 155 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 FER1L5A0AVI2 2057 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 LOC389332A0A1B0GUA5 103 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 CRXO43186 299 aaPredicted RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 OR2A4O95047 310 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 LINC00869P0C866 280 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 RCC1P18754 421 aaPredicted RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 OR2A7Q96R45 310 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 DNAJC4Q9NNZ3 241 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 OR5AC2Q9NZP5 309 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 LOC105371242A0A075B767 164 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 SYNGR3O43761 229 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 S1PR2O95136 353 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 RELQ04864 619 aaPredicted RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF146Q15072 292 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 KLF14Q8TD94 323 aaPredicted RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 AQP10Q96PS8 301 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM56-RWDD3S4R434 201 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF729A6NN14 1252 aaPredicted RBP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 PF4V1P10720 104 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 MAS1LP35410 378 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 RPS11P62280 158 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSAMP-207ENST00000539563 COPS9Q8WXC6 57 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM186Q96B77 213 aa5.58□□□□□ -1.52
LSAMP-207ENST00000539563 FREM3P0C091 2139 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 HKR1P10072 659 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 IBA57Q5T440 356 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 FAM53AQ6NSI3 398 aaPredicted RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 SMIM12Q96EX1 92 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 QTRT1Q9BXR0 403 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 C9orf172C9J069 976 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 FOXH1O75593 365 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 LIPFP07098 398 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 CXCL2P19875 107 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 HSPE1P61604 102 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 NCMAPQ5T1S8 102 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 C17orf51A8MQB3 221 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 ATXN7O15265 892 aaPredicted RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF883P0CG24 379 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 NUBP1P53384 320 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 RFLNBQ8N5W9 214 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 SGMS2Q8NHU3 365 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 RSG1Q9BU20 258 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 MRPL32Q9BYC8 188 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TNFRSF9Q07011 255 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TIMM23BQ5SRD1 257 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 ELF5Q9UKW6 265 aaPredicted RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 MRPS18CQ9Y3D5 142 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 YLPM1P49750 1951 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 PPIAL4CA0A0B4J2A2 164 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 B9A039 149 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TM4SF5O14894 197 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 RPLP1P05386 114 aaKnown RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 PPIAL4GP0DN37 164 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 MFAP2P55001 183 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 FAM106AQ4KMX7 169 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 EEF1AKMT3Q96AZ1 226 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 SMIM8Q96KF7 97 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 SRXN1Q9BYN0 137 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 IFITM10A6NMD0 228 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM229AB2RXF0 380 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 CD99P14209 185 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms