RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ACTL10Q5JWF8 245 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 LURAP1Q96LR2 239 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 PRR14LQ5THK1 2151 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 CD33P20138 364 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 LINC00596Q86U02 117 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 CXorf67Q86X51 503 aaPredicted RBP17.04■□□□□ 0.32
TMEM260-203ENST00000539559 SCCPDHQ8NBX0 429 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 DSPP15924 2871 aaKnown RBP17.04■□□□□ 0.32
TMEM260-203ENST00000539559 C17orf98A8MV24 154 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 NUPR1O60356 82 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 HNF1AP20823 631 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 OR3A1P47881 315 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 ATP5G3P48201 142 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 NRN1LQ496H8 165 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 ACSF3Q4G176 576 aaPredicted RBP17.04■□□□□ 0.32
TMEM260-203ENST00000539559 TGIF2LYQ8IUE0 185 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 TMEM256Q8N2U0 113 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 LINC00470Q9BZP3 86 aa17.04■□□□□ 0.32
TMEM260-203ENST00000539559 TRAV38-1A0A0B4J264 116 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 OR5B21A6NL26 309 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 TMEM250H0YL14 139 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 GRPP07492 148 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 CELA3BP08861 270 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 COA6Q5JTJ3 125 aaKnown RBP17.03■□□□□ 0.32
TMEM260-203ENST00000539559 TEX38Q6PEX7 206 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 NPCDR1Q9BY65 106 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 CBLN4Q9NTU7 201 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 OR6C3Q9NZP0 311 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 MPC1Q9Y5U8 109 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 PMS2P5A8MQ11 134 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 C11orf94C9JXX5 98 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 J3QT63 122 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 SOX15O60248 233 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 PSPNO60542 156 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 NXPH2O95156 264 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 BRWD1-AS2P59051 145 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 CENPVQ7Z7K6 275 aaPredicted RBP17.03■□□□□ 0.32
TMEM260-203ENST00000539559 ZNF114Q8NC26 417 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 TMEM147Q9BVK8 224 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 HSPB7Q9UBY9 170 aa17.03■□□□□ 0.32
TMEM260-203ENST00000539559 NPIPB11E5RHQ5 1161 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 SYNGR4O95473 234 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 C1QTNF9P0C862 333 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 IL3RAP26951 378 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 PAX5Q02548 391 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 SLC10A1Q14973 349 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 TMEM164Q5U3C3 297 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 CST9LP1Q5W188 147 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 TCF23Q7RTU1 214 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 TPRX1Q8N7U7 411 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 OR2M7Q8NG81 312 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 PLPPR2Q96GM1 343 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 SPRY4Q9C004 299 aa17.02■□□□□ 0.32
TMEM260-203ENST00000539559 RYDENQ9NUL5 291 aaKnown RBP17.02■□□□□ 0.32
TMEM260-203ENST00000539559 A0A0U1RQK1 487 aa17.02■□□□□ 0.31
TMEM260-203ENST00000539559 LRRC30A6NM36 301 aa17.02■□□□□ 0.31
TMEM260-203ENST00000539559 C9orf172C9J069 976 aa17.02■□□□□ 0.31
TMEM260-203ENST00000539559 TCAPO15273 167 aa17.02■□□□□ 0.31
TMEM260-203ENST00000539559 ZNF124Q15973 351 aa17.02■□□□□ 0.31
TMEM260-203ENST00000539559 OR10P1Q8NGE3 313 aa17.02■□□□□ 0.31
TMEM260-203ENST00000539559 DTD1Q8TEA8 209 aa17.02■□□□□ 0.31
TMEM260-203ENST00000539559 NEIL1Q96FI4 390 aaPredicted RBP17.02■□□□□ 0.31
TMEM260-203ENST00000539559 ZNF703Q9H7S9 590 aaPredicted RBP17.02■□□□□ 0.31
TMEM260-203ENST00000539559 BOKQ9UMX3 212 aaPredicted RBP17.02■□□□□ 0.31
TMEM260-203ENST00000539559 IGHV3-43A0A0B4J1X8 118 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 LRP5LA4QPB2 252 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 SCGB1D1O95968 90 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 IGHV3-43DP0DP04 118 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 FIP1L1Q6UN15 594 aaKnown RBP17.01■□□□□ 0.31
TMEM260-203ENST00000539559 MDP1Q86V88 176 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 ZNF320A2RRD8 509 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 WNT9BO14905 357 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 NEURL1O76050 574 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 COX5BP10606 129 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 G0S2P27469 103 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 ARR3P36575 388 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 TMEM18Q96B42 140 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 NOL4LQ96MY1 436 aaPredicted RBP17.01■□□□□ 0.31
TMEM260-203ENST00000539559 PARD6GQ9BYG4 376 aaPredicted RBP17.01■□□□□ 0.31
TMEM260-203ENST00000539559 TIMM9Q9Y5J7 89 aa17.01■□□□□ 0.31
TMEM260-203ENST00000539559 MED13Q9UHV7 2174 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 DEFB108AA8MXU0 73 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 GGCTO75223 188 aaKnown RBP17■□□□□ 0.31
TMEM260-203ENST00000539559 GCGP01275 180 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 COX5AP20674 150 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 PDLIM4P50479 330 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 GNB1P62873 340 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 LINC00696Q6ZRV3 163 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 SDSLQ96GA7 329 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 ACY3Q96HD9 319 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 OR2J1Q9GZK6 312 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 ASPMQ8IZT6 3477 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 NDUFB4O95168 129 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 CNN1P51911 297 aaKnown RBP17■□□□□ 0.31
TMEM260-203ENST00000539559 CASP6P55212 293 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 AESQ08117 197 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 ZNF826PQ6ZT77 177 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 MCEMP1Q8IX19 187 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 PKIBQ9C010 78 aa17■□□□□ 0.31
TMEM260-203ENST00000539559 PATZ1Q9HBE1 687 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms