RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ADRA2AP08913 450 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A15PP0C7V4 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A13PP0C7W8 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A14PP0C7W9 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 FAM90A24PP0C7X0 464 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 C1QTNF9P0C862 333 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 OR10J1P30954 320 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 APCDD1LQ8NCL9 501 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 VN1R17PQ8TDU5 208 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 OR4C12Q96R67 309 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 ASXL3Q9C0F0 2248 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 CBY1Q9Y3M2 126 aa12.46□□□□□ -0.42
CACNB1-206ENST00000539338 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 COX19Q49B96 90 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 ATP1A1-AS1Q5TC04 95 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 TAF15Q92804 592 aaKnown RBP eCLIP12.45□□□□□ -0.42
CACNB1-206ENST00000539338 MEGF10Q96KG7 1140 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 NPIPB9F8W1W9 429 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 APCSP02743 223 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 GNLYP22749 145 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 MEF2BQ02080 365 aaPredicted RBP12.45□□□□□ -0.42
CACNB1-206ENST00000539338 RIPPLY2Q5TAB7 128 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 FAM57AQ8TBR7 257 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 BET1LQ9NYM9 111 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 ICE1Q9Y2F5 2266 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 FAM3BP58499 235 aaPredicted RBP12.45□□□□□ -0.42
CACNB1-206ENST00000539338 NR2C2APQ86WQ0 139 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 Q8WTZ3 238 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 RHOVQ96L33 236 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 SLC2A8Q9NY64 477 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 PSME4Q14997 1843 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 TMEM187Q14656 261 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 POC1AQ8NBT0 407 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 VWCEQ96DN2 955 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 PAXXQ9BUH6 204 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 TMEM191AQ9H0A3 160 aa12.45□□□□□ -0.42
CACNB1-206ENST00000539338 ADAM11O75078 769 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 HSPB1P04792 205 aaKnown RBP12.44□□□□□ -0.42
CACNB1-206ENST00000539338 RPS11P62280 158 aaKnown RBP eCLIP12.44□□□□□ -0.42
CACNB1-206ENST00000539338 C2orf68Q2NKX9 166 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 VWA1Q6PCB0 445 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 RNASE6Q93091 150 aaKnown RBP12.44□□□□□ -0.42
CACNB1-206ENST00000539338 STARD4Q96DR4 205 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 IL19Q9UHD0 177 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 ANKRD36A6QL64 1941 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 DNASE2O00115 360 aaPredicted RBP12.44□□□□□ -0.42
CACNB1-206ENST00000539338 FOXH1O75593 365 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 RND3P61587 244 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 TMEM97Q5BJF2 176 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 MIC13Q5XKP0 118 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 MARS2Q96GW9 593 aaKnown RBP12.44□□□□□ -0.42
CACNB1-206ENST00000539338 ZNF714Q96N38 554 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 PLAUP00749 431 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 SCGB1C2P0DMR2 95 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 PF4V1P10720 104 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 ASPHD2Q6ICH7 369 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 PRDM14Q9GZV8 571 aa12.44□□□□□ -0.42
CACNB1-206ENST00000539338 TRBV23-1A0A0A0MS06 115 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 TGIF2-C20orf24A0A0A6YYL0 155 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 HIST1H1BP16401 226 aaKnown RBP12.43□□□□□ -0.42
CACNB1-206ENST00000539338 TMEM54Q969K7 222 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 PCGF1Q9BSM1 259 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 PKIBQ9C010 78 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 RECKO95980 971 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
CACNB1-206ENST00000539338 ZNF708P17019 499 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 HOXA4Q00056 320 aaPredicted RBP12.43□□□□□ -0.42
CACNB1-206ENST00000539338 RIGQ13278 110 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 WDR25Q64LD2 544 aaPredicted RBP12.43□□□□□ -0.42
CACNB1-206ENST00000539338 C12orf54Q6X4T0 127 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 LEAP2Q969E1 77 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 AKIRIN1Q9H9L7 192 aaPredicted RBP12.43□□□□□ -0.42
CACNB1-206ENST00000539338 LPAR2Q9HBW0 351 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 CACNA1BQ00975 2339 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 ZG16O60844 167 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 RFPL3SP0C7P2 107 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 LAMTOR1Q6IAA8 161 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 OR8G5Q8NG78 346 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 TP53RKQ96S44 253 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 C10orf128Q5T292 105 aa12.43□□□□□ -0.42
CACNB1-206ENST00000539338 A0A087WV48 116 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 E9PLN8 166 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 MFAP2P55001 183 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 PKIAP61925 76 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 KLF14Q8TD94 323 aaPredicted RBP12.42□□□□□ -0.42
CACNB1-206ENST00000539338 VKORC1Q9BQB6 163 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 LCTP09848 1927 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 SIP14410 1827 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 CEACAM18A8MTB9 384 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 ZIC3O60481 467 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 ECSCRQ19T08 205 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 DHRS11Q6UWP2 260 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 MAP1LC3CQ9BXW4 147 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 NPIPB13A6NJU9 1138 aa12.42□□□□□ -0.42
CACNB1-206ENST00000539338 ZNF716A6NP11 495 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms