RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 GLP1RP43220 463 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 RBM11P57052 281 aaKnown RBP5.81□□□□□ -1.48
LMO3-220ENST00000539232 FAM189A2Q15884 450 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 LRRC75BQ2VPJ9 315 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 TMEM95Q3KNT9 176 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 ACSM3Q53FZ2 586 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 KRBOX4Q5JUW0 171 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 UBE2NLQ5JXB2 153 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 GLIPR1L1Q6UWM5 242 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 SSX9Q7RTT3 188 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 REC114Q7Z4M0 266 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 TRAPPC6BQ86SZ2 158 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 ABHD12Q8N2K0 398 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 C11orf44Q8N8P7 122 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 STOML3Q8TAV4 291 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 MRGPRDQ8TDS7 321 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 CCDC107Q8WV48 283 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 PCNPQ8WW12 178 aaKnown RBP5.81□□□□□ -1.48
LMO3-220ENST00000539232 CORO2AQ92828 525 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 FAM46BQ96A09 425 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 KIRREL1Q96J84 757 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 PFDN5Q99471 154 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 MFFQ9GZY8 342 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 TMEM133Q9H2Q1 129 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 ZNF702PQ9H963 129 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 HRASLSQ9HDD0 168 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 FOXJ3Q9UPW0 622 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 ST3GAL6Q9Y274 331 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 MRPS28Q9Y2Q9 187 aaKnown RBP5.81□□□□□ -1.48
LMO3-220ENST00000539232 MMP24Q9Y5R2 645 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
LMO3-220ENST00000539232 A0A0A6YYD4 124 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 KBTBD11-OT1A0A1B0GTJ5 212 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 SHISA3A0PJX4 238 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 ANKRD20A5PA0PJZ0 165 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 RNF222A6NCQ9 220 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 METTL21EPA6NDL7 271 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 LY6LH3BQJ8 138 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 C15orf65H3BRN8 121 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 BCL2L11O43521 198 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 ARL6IP5O75915 188 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 OR7C1O76099 320 aaPredicted RBP5.8□□□□□ -1.48
LMO3-220ENST00000539232 IGLV1-47P01700 117 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 CD2P06729 351 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 NFYBP25208 207 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 MAS1LP35410 378 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 GPX4P36969 197 aaPredicted RBP5.8□□□□□ -1.48
LMO3-220ENST00000539232 KCNJ3P48549 501 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 BLCAPP62952 87 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 RBMS2Q15434 407 aaKnown RBP5.8□□□□□ -1.48
LMO3-220ENST00000539232 OR2B11Q5JQS5 317 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 HEPN1Q6WQI6 88 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 CEACAM19Q7Z692 300 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 LYG1Q8N1E2 194 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 OSR2Q8N2R0 312 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 JAGN1Q8N5M9 183 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 OR2AK2Q8NG84 335 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 OR13D1Q8NGV5 346 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 EDARADDQ8WWZ3 215 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 SAT2Q96F10 170 aaPredicted RBP5.8□□□□□ -1.48
LMO3-220ENST00000539232 C2orf88Q9BSF0 95 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 METTL9Q9H1A3 318 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 C16orf95Q9H693 158 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 CALYQ9NYX4 217 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 IL36GQ9NZH8 169 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 FBLN5Q9UBX5 448 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 UBE2J1Q9Y385 318 aaPredicted RBP5.8□□□□□ -1.48
LMO3-220ENST00000539232 RNF114Q9Y508 228 aa5.8□□□□□ -1.48
LMO3-220ENST00000539232 TRGV10A0A0A0MS01 117 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 IGHV3-43A0A0B4J1X8 118 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 COLCA2A8K830 154 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 FAM90A22PA8MWA6 464 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 NPIPB11E5RHQ5 1161 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 M0QZ24 198 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 AP4M1O00189 453 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 ARPC5O15511 151 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CRTAPO75718 401 aaPredicted RBP5.79□□□□□ -1.48
LMO3-220ENST00000539232 TSPAN15O95858 294 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 RBP4P02753 201 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 MT-ND4P03905 459 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 AMY1AP04745 511 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 AMY2AP04746 511 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CSN2P05814 226 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 UCHL1P09936 223 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 IGHV3-43DP0DP04 118 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CD37P11049 281 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CCR6P51684 374 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 EFNB2P52799 333 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 LGALS4P56470 323 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 SNRPEP62304 92 aaKnown RBP5.79□□□□□ -1.48
LMO3-220ENST00000539232 BLOC1S1P78537 153 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 QRFPP83859 136 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 UNC119Q13432 240 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 IL13RA2Q14627 380 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 PNLIPRP3Q17RR3 467 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 Q6ZTK2 550 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 CHST4Q8NCG5 386 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 OR4F5Q8NH21 305 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 OR1L1Q8NH94 360 aa5.79□□□□□ -1.48
LMO3-220ENST00000539232 RXFP4Q8TDU9 374 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms