RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 TSSK2Q96PF2 358 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5M11Q96RB7 305 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 CLCC1Q96S66 551 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 GPX7Q96SL4 187 aaPredicted RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 P2RX4Q99571 388 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 SDHCQ99643 169 aaPredicted RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM173AQ9BQD7 235 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 PRSS27Q9BQR3 290 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 DEFB126Q9BYW3 111 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 OR11A1Q9GZK7 315 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 POLR2J2Q9GZM3 115 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 NXF2Q9GZY0 626 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 POLR2J3Q9H1A7 115 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TLNRD1Q9H1K6 362 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 MIXL1Q9H2W2 232 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 MAP1LC3AQ9H492 121 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 B3GNT2Q9NY97 397 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 RASL12Q9NYN1 266 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 B3GAT1Q9P2W7 334 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 SPRR3Q9UBC9 169 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 DUX4Q9UBX2 424 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 RSL24D1Q9UHA3 163 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 STUB1Q9UNE7 303 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF443Q9Y2A4 671 aaPredicted RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 KLF13Q9Y2Y9 288 aaPredicted RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 AMDHD2Q9Y303 409 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TMED3Q9Y3Q3 217 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 PEX16Q9Y5Y5 336 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF780BQ9Y6R6 833 aa1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 HEATR1Q9H583 2144 aaKnown RBP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.49□□□□□ -2.17
CBX3P4-201ENST00000538909 TANC2Q9HCD6 1990 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 USF3Q68DE3 2245 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MED13LQ71F56 2210 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DNAH3Q8TD57 4116 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 F8P00451 2351 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TEP1Q99973 2627 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CSPG4Q6UVK1 2322 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TRAV18A0A075B6X5 111 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A087WUJ7 227 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A0J9YW62 118 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF816-ZNF321PA0A0X1KG74 233 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 LOC102725191A0A1B0GVB3 256 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TINCRA0A1B0GVN0 87 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DAPL1A0PJW8 107 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CIB4A0PJX0 185 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM72A0PK05 275 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 IGSF23A1L1A6 192 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2M5A3KFT3 312 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ARRDC5A6NEK1 342 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5H14A6NHG9 310 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC22A20A6NK97 555 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DHRS7CA6NNS2 312 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 HSPB2A8KAH6 182 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF878C9JN71 531 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 F8VVB4 439 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 F8VWA3 439 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 G3V4G9 280 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 H3BTX0 84 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 J3QR06 171 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ARPC2O15144 300 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 HMGB3O15347 200 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 FGF16O43320 207 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SYT7O43581 403 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TRAF3IP2O43734 574 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SOX15O60248 233 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 GNG7O60262 68 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC16A7O60669 478 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 WDR1O75083 606 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CA11O75493 328 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TNFSF13O75888 250 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 NDUFA7O95182 113 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TSPAN13O95857 204 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 HPRP00739 348 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CA1P00915 261 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 IFNA17P01571 189 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 IGHMP01871 453 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PRB2P02812 416 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 BGLAPP02818 100 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OPN1SWP03999 348 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DBIP07108 87 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 LIMS3P0CW19 117 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 LIMS4P0CW20 117 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ADORA3P0DMS8 318 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF35P13682 527 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 GP9P14770 177 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MUC1P15941 1255 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 KLK2P20151 261 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RAB3BP20337 219 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 COX5AP20674 150 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 FGF7P21781 194 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 AADACP22760 399 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 EDNRAP25101 427 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 LOXP28300 417 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RPL12P30050 165 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 GABRA3P34903 492 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CA7P43166 264 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR3A2P47893 321 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 P2RY1P47900 373 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 NUDT2P50583 147 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms