RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 OR1B1Q8NGR6 318 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 CFHR4Q92496 578 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 NXF5Q9H1B4 397 aaKnown RBP9.06□□□□□ -0.96
RTN3-208ENST00000537981 LYRM4Q9HD34 91 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 MMP17Q9ULZ9 603 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 THADAQ6YHU6 1953 aa9.06□□□□□ -0.96
RTN3-208ENST00000537981 ADH1BP00325 375 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 KITLGP21583 273 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 CD1BP29016 333 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 GABRA2P47869 451 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 CLDN15P56746 228 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 TGFBR3Q03167 851 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 RBPJQ06330 500 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 PLPPR5Q32ZL2 321 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 WIPI1Q5MNZ9 446 aaPredicted RBP9.05□□□□□ -0.96
RTN3-208ENST00000537981 ASCL4Q6XD76 172 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 FER1L6-AS1Q8NA97 138 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 RNF212BA8MTL3 300 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 SHISA8B8ZZ34 492 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 G3V4G9 280 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 CCL16O15467 120 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 CEACAM5P06731 702 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 ZNF90Q03938 601 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 LRRC75BQ2VPJ9 315 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 GCSAMLQ5JQS6 135 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 SAMD13Q5VXD3 122 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 OR5D13Q8NGL4 314 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 PATE1Q8WXA2 126 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 ZMAT4Q9H898 229 aa9.05□□□□□ -0.96
RTN3-208ENST00000537981 IGKV1-27A0A075B6S5 117 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 GJE1A6NN92 205 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 OR7C2O60412 319 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 CLDN14O95500 239 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 PRNPP04156 253 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 CA3P07451 260 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 CA7P43166 264 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 HERV-K104P61576 105 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 GAB4Q2WGN9 574 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 BVES-AS1Q5T3Y7 98 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 DPF1Q92782 380 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 ADIPOR1Q96A54 375 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 ELSPBP1Q96BH3 223 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 LRRC3BQ96PB8 259 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 WDR61Q9GZS3 305 aaKnown RBP9.04□□□□□ -0.96
RTN3-208ENST00000537981 METTL7AQ9H8H3 244 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 NRASP01111 189 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 KRASP01116 189 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 MC5RP33032 325 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 CEACAM3P40198 252 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 PLCXD3Q63HM9 321 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 EBLN2Q6P2I7 272 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 C5orf17Q8NAS9 161 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 RAB11FIP5Q9BXF6 653 aa9.04□□□□□ -0.96
RTN3-208ENST00000537981 TMED7-TICAM2A0A0A6YYA0 188 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 SPAARA0A1B0GVQ0 90 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 OTOL1A6NHN0 477 aaPredicted RBP9.03□□□□□ -0.96
RTN3-208ENST00000537981 K7EN84 100 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 SLC31A1O15431 190 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 CD38P28907 300 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 NTSR1P30989 418 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 OR1D4P47884 311 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 PAX2Q02962 417 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 SMAGPQ0VAQ4 97 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 Q0VG73 95 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 CARD17Q5XLA6 110 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 OR2Y1Q8NGV0 311 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 OR4S2Q8NH73 311 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 TSKUQ8WUA8 353 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 TAF15Q92804 592 aaKnown RBP eCLIP9.03□□□□□ -0.96
RTN3-208ENST00000537981 FNDC4Q9H6D8 234 aaPredicted RBP9.03□□□□□ -0.96
RTN3-208ENST00000537981 CCL28Q9NRJ3 127 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 NPIPA5E9PKD4 350 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 ZNF324O75467 553 aaPredicted RBP9.03□□□□□ -0.96
RTN3-208ENST00000537981 AGFG2O95081 481 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 IGLC1P0CG04 106 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 SSTR5P35346 364 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 WASP42768 502 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 TFF3Q07654 80 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 TMEM52BQ4KMG9 183 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 SPANXN5Q5MJ07 72 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 STUMQ69YW2 141 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 STXBP6Q8NFX7 210 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 OR10G8Q8NGN5 311 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 OCC1Q8TAD7 63 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 MCRIP2Q9BUT9 160 aaKnown RBP9.03□□□□□ -0.96
RTN3-208ENST00000537981 PHF7Q9BWX1 381 aaPredicted RBP9.03□□□□□ -0.96
RTN3-208ENST00000537981 NPIPA1Q9UND3 350 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 PPP1R3CQ9UQK1 317 aa9.03□□□□□ -0.96
RTN3-208ENST00000537981 A0A096LPE4 126 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 CXorf51AA0A1B0GTR3 108 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 A0A1W2PPZ6 126 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 hDV102S1A0JD36 115 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 FAM166BA8MTA8 275 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 VENTXO95231 258 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 TIMP3P35625 211 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 FAM71F2Q6NXP2 309 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 WDR5BQ86VZ2 330 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms