RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PRICKLE4Q2TBC4 344 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 KHDC1LQ5JSQ8 128 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 C5orf30Q96GV9 206 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 NGBQ9NPG2 151 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 HCSTQ9UBK5 93 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 PPIL1Q9Y3C6 166 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 SERF1AO75920 110 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 EPPINO95925 133 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 ZNF735P0CB33 412 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 GPX4P36969 197 aaPredicted RBP4.94□□□□□ -1.62
CSMD1-215ENST00000537824 GAGE2BQ13066 116 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 GAGE2EQ4V326 116 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 ABHD14BQ96IU4 210 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 GAGE2DQ9UEU5 116 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 J3KRW8 73 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 LGALS3P17931 250 aaKnown RBP4.94□□□□□ -1.62
CSMD1-215ENST00000537824 PMELP40967 661 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 PRSS12P56730 875 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 SLC36A1Q7Z2H8 476 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 NAA38Q9BRA0 125 aaKnown RBP4.94□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM30AQ9NV96 361 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 SCRG1O75711 98 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 UBE2V1Q13404 147 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 SFTA2Q6UW10 78 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 CHODLQ9H9P2 273 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM160Q9NX00 188 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 SLC45A1Q9Y2W3 748 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 S1PR2O95136 353 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 ZPBPQ9BS86 351 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 PXMP4Q9Y6I8 212 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 A0A087WWC5 75 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 RPS11P62280 158 aaKnown RBP eCLIP4.94□□□□□ -1.62
CSMD1-215ENST00000537824 SLC37A2Q8TED4 501 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 LHX9Q9NQ69 397 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 GOSR1O95249 250 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 FAM78AQ5JUQ0 283 aa4.94□□□□□ -1.62
CSMD1-215ENST00000537824 SRP19P09132 144 aaKnown RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 CEACAM16Q2WEN9 425 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 PTX4Q96A99 478 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 P2RX4Q99571 388 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 FLRT3Q9NZU0 649 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 COL24A1Q17RW2 1714 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TNFSF13O75888 250 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 MMD2Q8IY49 270 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 A0A1B0GX78 115 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 MEF2CQ06413 473 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 ICAM4Q14773 271 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 RHBDD1Q8TEB9 315 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 FRG2CA6NGY1 282 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 K7ESF4 209 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 PSG1P11464 419 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 NOGQ13253 232 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 FAM181AQ8N9Y4 354 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TRAV8-1A0A0A6YYK1 113 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM189A5PLL7 270 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 M0QZ24 198 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 DNAL4O96015 105 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 PNLIPP16233 465 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM211Q6ICI0 200 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 RTL10Q7L3V2 364 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 ASB10Q8WXI3 467 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 RPRMQ9NS64 109 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 SPINK2P20155 84 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 CXorf66Q5JRM2 361 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 OR2Z1Q8NG97 314 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 NT5CQ8TCD5 201 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM208Q9BTX3 173 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TRAV8-6A0A0B4J262 113 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 KIR3DL2P43630 455 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 NANOS3P60323 173 aaKnown RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 IBA57Q5T440 356 aaKnown RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 MBNL2Q5VZF2 373 aaKnown RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 SLC23A3Q6PIS1 610 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 UNQ5815/PRO19632Q6UWF5 114 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 CHST5Q9GZS9 411 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 DSPPQ9NZW4 1301 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 OR11H12B2RN74 326 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 ERGP11308 486 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 CYB561P49447 251 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 ZNF324BQ6AW86 544 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 OR11H1Q8NG94 326 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 OR11H2Q8NH07 326 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 ASB5Q8WWX0 329 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 PRDM13Q9H4Q3 707 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 C5orf66Q9H5L9 145 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 KLHDC2Q9Y2U9 406 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 A0A1W2PP11 408 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 B4GALNT1Q00973 533 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TUSC5Q8IXB3 177 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 NHP2Q9NX24 153 aaKnown RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 PLA2G3Q9NZ20 509 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 CCL5P13501 91 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 SUMO3P55854 103 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 YBX1P67809 324 aaKnown RBP4.93□□□□□ -1.62
CSMD1-215ENST00000537824 OR13C6PQ8NH95 151 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 C18orf15Q96N68 181 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 TIMP4Q99727 224 aa4.93□□□□□ -1.62
CSMD1-215ENST00000537824 ATXN7O15265 892 aaPredicted RBP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 HYPMO75409 117 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 ASAH2BP0C7U1 165 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms