RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR2A7Q96R45 310 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 MBD1Q9UIS9 605 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-209ENST00000537178 CCL27Q9Y4X3 112 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 ATRXP46100 2492 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 TRBV5-3A0A0A0MS03 114 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 NPIPB8E9PQR5 432 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 DLL1O00548 723 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 RNASE1P07998 156 aaKnown RBP9.21□□□□□ -0.93
CLIP1-209ENST00000537178 GZMMP51124 257 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 ZNF658BQ4V348 819 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-209ENST00000537178 DNLZQ5SXM8 178 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 ARL6IP6Q8N6S5 226 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 HDHD3Q9BSH5 251 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-209ENST00000537178 SMOC1Q9H4F8 434 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 AKAP6Q13023 2319 aa9.21□□□□□ -0.93
CLIP1-209ENST00000537178 DNAL4O96015 105 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 HLA-DRB1P01911 266 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 RCC1P18754 421 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-209ENST00000537178 EFNB2P52799 333 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 JOSD1Q15040 202 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-209ENST00000537178 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 LINC00518Q8N0U6 118 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 TRAV30A0A087WSZ9 112 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 IFNL4K9M1U5 179 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 MUC1P15941 1255 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-209ENST00000537178 ZAR1Q86SH2 424 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 OR52M1Q8NGK5 317 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 FAM131CQ96AQ9 280 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 MRAP2Q96G30 205 aa9.21□□□□□ -0.94
CLIP1-209ENST00000537178 ELF5Q9UKW6 265 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-209ENST00000537178 TRGC1P0CF51 173 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FOLR2P14207 255 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 MDKP21741 143 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-209ENST00000537178 SSTR5P35346 364 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 ZP4Q12836 540 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM106AQ4KMX7 169 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 GUCD1Q96NT3 240 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 TMEM222Q9H0R3 208 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 LAMA2P24043 3122 aaKnown RBP9.2□□□□□ -0.94
CLIP1-209ENST00000537178 A0A0B4J293 547 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 A0A1W2PPC1 479 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A10PA6NDY2 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A18PA6NE21 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A16PA6NEW6 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A20PA6NIJ5 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A8PA6NJQ4 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A7PA6NKC0 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A22PA8MWA6 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A12PA8MX19 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A5PA8MXJ8 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A23PA8MXZ1 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 NDUFA2O43678 99 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A15PP0C7V4 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A13PP0C7W8 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A14PP0C7W9 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A24PP0C7X0 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FSTP19883 344 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 TSPOP30536 169 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 MFAP4P55083 255 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 OR10AG1Q8NH19 301 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 CCL13Q99616 98 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 METTL1Q9UBP6 276 aaKnown RBP9.2□□□□□ -0.94
CLIP1-209ENST00000537178 KLK13Q9UKR3 277 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 PCM1Q15154 2024 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 FAM90A26D6RGX4 464 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 TRGC2P03986 189 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 ANOS1P23352 680 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 TSPAN7P41732 249 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 LINC00469Q8N7U9 141 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 OR10S1Q8NGN2 331 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 ZNF385AQ96PM9 386 aaKnown RBP9.2□□□□□ -0.94
CLIP1-209ENST00000537178 SPOCK3Q9BQ16 436 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 PARD6GQ9BYG4 376 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-209ENST00000537178 GEMIN7Q9H840 131 aaKnown RBP9.2□□□□□ -0.94
CLIP1-209ENST00000537178 ST6GALNAC2Q9UJ37 374 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 RND2P52198 227 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 ZNF79Q15937 498 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 UNQ5815/PRO19632Q6UWF5 114 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 OR1P1Q8NH06 330 aa9.2□□□□□ -0.94
CLIP1-209ENST00000537178 PPP1R17O96001 155 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 FCARP24071 287 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 TAF15Q92804 592 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLIP1-209ENST00000537178 ZNF488Q96MN9 340 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 HILPDAQ9Y5L2 63 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 IGKV3D-15A0A087WSY6 115 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 IGKV3-15P01624 115 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 TNFSF10P50591 281 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 PSG9Q00887 426 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 GGTLC2Q14390 218 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 TMEM177Q53S58 311 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 ZNF385CQ66K41 422 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-209ENST00000537178 KCNK7Q9Y2U2 307 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 VWA8A3KMH1 1905 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 hCG_38984A0A1B0GV85 526 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 NPBWR2P48146 333 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 UCP2P55851 309 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 CX3CL1P78423 397 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 C1orf185Q5T7R7 199 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 OVCH2Q7RTZ1 564 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms