RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PRNDQ9UKY0 176 aa10.9□□□□□ -0.67
SPG11-203ENST00000535302 PDE6DO43924 150 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 GPX1P07203 203 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 ITLN2Q8WWU7 325 aaPredicted RBP10.89□□□□□ -0.67
SPG11-203ENST00000535302 DIDO1Q9BTC0 2240 aaKnown RBP10.89□□□□□ -0.67
SPG11-203ENST00000535302 NPFFO15130 113 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 C1QL1O75973 258 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 HBZP02008 142 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 SAA1P0DJI8 122 aaPredicted RBP10.89□□□□□ -0.67
SPG11-203ENST00000535302 ATP6V0CP27449 155 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 FGF11Q92914 225 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 RARRES2Q99969 163 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 LINC00470Q9BZP3 86 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 K7N7A8 449 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 OR2H2O95918 312 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 BIVMQ86UB2 503 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 RBM38Q9H0Z9 239 aaKnown RBP10.89□□□□□ -0.67
SPG11-203ENST00000535302 CISD1Q9NZ45 108 aaKnown RBP10.89□□□□□ -0.67
SPG11-203ENST00000535302 COL4A5P29400 1685 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 SLC25A17O43808 307 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 SRSF12Q8WXF0 261 aaKnown RBP10.89□□□□□ -0.67
SPG11-203ENST00000535302 ANOS1P23352 680 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 ZNF273Q14593 569 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 GLMPQ8WWB7 406 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 CCL19Q99731 98 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 SRXN1Q9BYN0 137 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 OR5AC2Q9NZP5 309 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 FOXJ2Q9P0K8 574 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 PTP4A3O75365 173 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 LINC00869P0C866 280 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 MIC13Q5XKP0 118 aa10.89□□□□□ -0.67
SPG11-203ENST00000535302 GEMIN7Q9H840 131 aaKnown RBP10.89□□□□□ -0.67
SPG11-203ENST00000535302 GZMMP51124 257 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 ESPL1Q14674 2120 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 ST6GALNAC6Q969X2 333 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 GPR82Q96P67 336 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 SHANK3Q9BYB0 1731 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 TRBV5-3A0A0A0MS03 114 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 SIAH2O43255 324 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 PARLQ9H300 379 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 RBKSQ9H477 322 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 USP54Q70EL1 1684 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 TMEM210A6NLX4 147 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 PLA2G10O15496 165 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 TRGC2P03986 189 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 FAM106CPP0CH98 169 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 ZNF79Q15937 498 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 IBA57Q5T440 356 aaKnown RBP10.88□□□□□ -0.67
SPG11-203ENST00000535302 ZNF324BQ6AW86 544 aaPredicted RBP10.88□□□□□ -0.67
SPG11-203ENST00000535302 AQP10Q96PS8 301 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 FOXI3A8MTJ6 420 aaPredicted RBP10.88□□□□□ -0.67
SPG11-203ENST00000535302 C8orf82Q6P1X6 216 aaPredicted RBP10.88□□□□□ -0.67
SPG11-203ENST00000535302 TMEM56-RWDD3S4R434 201 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 PGA4P0DJD7 388 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 PGA5P0DJD9 388 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 FUT5Q11128 374 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 DCAF12L2Q5VW00 463 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 LINC01560Q8TB33 94 aa10.88□□□□□ -0.67
SPG11-203ENST00000535302 TGIF2-C20orf24A0A0A6YYL0 155 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 CTDSPLO15194 276 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 EGR1P18146 543 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 SCAND1P57086 179 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 LSM10Q969L4 123 aaKnown RBP10.87□□□□□ -0.67
SPG11-203ENST00000535302 ANGPTL4Q9BY76 406 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 RGPD4Q7Z3J3 1758 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 COX6CP09669 75 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 ASAH2BP0C7U1 165 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.87□□□□□ -0.67
SPG11-203ENST00000535302 SIGIRRQ6IA17 410 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 ANKRD31Q8N7Z5 1873 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 NGFRP08138 427 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 SP9P0CG40 484 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 FAM214BQ7L5A3 538 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
SPG11-203ENST00000535302 DIRC2Q96SL1 478 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 NPFFR1Q9GZQ6 430 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 PLXNB2O15031 1838 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 TIAF1O95411 115 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 ATP5J2P56134 94 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 TMEM177Q53S58 311 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 SSBP3Q9BWW4 388 aaPredicted RBP10.87□□□□□ -0.67
SPG11-203ENST00000535302 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.87□□□□□ -0.67
SPG11-203ENST00000535302 PRR32B1ATL7 298 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.67
SPG11-203ENST00000535302 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
SPG11-203ENST00000535302 SH3BGRL3Q9H299 93 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 RPL27AP46776 148 aaKnown RBP10.86□□□□□ -0.67
SPG11-203ENST00000535302 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 LOC101059948A0A1B0GTJ6 334 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 LCN2P80188 198 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
SPG11-203ENST00000535302 CEACAM21Q3KPI0 293 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 ZNF385CQ66K41 422 aaPredicted RBP10.86□□□□□ -0.67
SPG11-203ENST00000535302 MYO16Q9Y6X6 1858 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms