RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TNFAIP8L1Q8WVP5 186 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 HOPXQ9BPY8 73 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-215ENST00000533818 CLN6Q9NWW5 311 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 KCNIP1Q9NZI2 227 aa7.48□□□□□ -1.21
CSDE1-215ENST00000533818 MCRIP1C9JLW8 97 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 IGLV2-23P01705 113 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 GSTT2P0CG29 244 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 GSTT2BP0CG30 244 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 TFPI2P48307 235 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 KRTAP10-1P60331 282 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 RPS27AP62979 156 aaKnown RBP7.47□□□□□ -1.21
CSDE1-215ENST00000533818 NHLRC3Q5JS37 347 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 LPCAT4Q643R3 524 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 OR13C3Q8NGS6 347 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 DEFB104AQ8WTQ1 72 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 PELI1Q96FA3 418 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 ABHD14BQ96IU4 210 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 GPER1Q99527 375 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 FAM192AQ9GZU8 254 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 GORASP2Q9H8Y8 452 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 MRGBPQ9NV56 204 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 TBC1D24Q9ULP9 559 aa7.47□□□□□ -1.21
CSDE1-215ENST00000533818 IGHV3-35A0A0C4DH35 117 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 CDRT1O95170 752 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 IFNA5P01569 189 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 CLEC3BP05452 202 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-215ENST00000533818 FUT3P21217 361 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 HAMPP81172 84 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 CDK5Q00535 292 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 TNXAQ16473 311 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 MPV17LQ2QL34 196 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF529Q6P280 563 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF66Q6ZN08 573 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 PDPNQ86YL7 162 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 TTC9CQ8N5M4 171 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 SRSF12Q8WXF0 261 aaKnown RBP7.46□□□□□ -1.22
CSDE1-215ENST00000533818 GALMQ96C23 342 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 TBX5Q99593 518 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 STEAP1Q9UHE8 339 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF221Q9UK13 617 aa7.46□□□□□ -1.22
CSDE1-215ENST00000533818 GABRPO00591 440 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 APOA2P02652 100 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 ISG15P05161 165 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 HTN3P15516 51 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 SLC22A6Q4U2R8 563 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 TMEM41BQ5BJD5 291 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 CDPF1Q6NVV7 123 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF554Q86TJ5 538 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 GAPTQ8N292 157 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF383Q8NA42 475 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 OR51A4Q8NGJ6 313 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 EEF1AKMT3Q96AZ1 226 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 FEVQ99581 238 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 SAR1AQ9NR31 198 aa7.45□□□□□ -1.22
CSDE1-215ENST00000533818 SULT1C4O75897 302 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 SPART-AS1P0CW21 52 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 RPA2P15927 270 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 PSMB6P28072 239 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 TMEM236Q5W0B7 351 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 TMEM88Q6PEY1 159 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 SLC25A42Q86VD7 318 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 OR10G2Q8NGC3 310 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 OR5D14Q8NGL3 314 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 ANP32BQ92688 251 aaKnown RBP7.44□□□□□ -1.22
CSDE1-215ENST00000533818 CPNE2Q96FN4 548 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-215ENST00000533818 SPIN2AQ99865 258 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 SPIN2BQ9BPZ2 258 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 TEX12Q9BXU0 123 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 METTL9Q9H1A3 318 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 SPACA1Q9HBV2 294 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 DAZ1Q9NQZ3 744 aaKnown RBP7.44□□□□□ -1.22
CSDE1-215ENST00000533818 TMEM14BQ9NUH8 114 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 TVP23BQ9NYZ1 205 aa7.44□□□□□ -1.22
CSDE1-215ENST00000533818 SAMHD1Q9Y3Z3 626 aaKnown RBP7.44□□□□□ -1.22
CSDE1-215ENST00000533818 A0A1W2PQL4 384 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-215ENST00000533818 PROP1O75360 226 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 GPX5O75715 221 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 OXTP01178 125 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
CSDE1-215ENST00000533818 ATP6V1B2P21281 511 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 GK3PQ14409 553 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 PRSS8Q16651 343 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 LEMD1Q68G75 181 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 RAB12Q6IQ22 244 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 C19orf35Q6ZS72 473 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 BCDIN3DQ7Z5W3 292 aaKnown RBP7.43□□□□□ -1.22
CSDE1-215ENST00000533818 STHQ8IWL8 128 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 OR2G2Q8NGZ5 317 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 IL1F10Q8WWZ1 152 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 ACOT12Q8WYK0 555 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 HARBI1Q96MB7 349 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 SRSF8Q9BRL6 282 aaKnown RBP7.43□□□□□ -1.22
CSDE1-215ENST00000533818 SLC2A9Q9NRM0 540 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 SLC35D1Q9NTN3 355 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 CLEC5AQ9NY25 188 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 FRRS1LQ9P0K9 344 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF257Q9Y2Q1 563 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 LRRC42Q9Y546 428 aa7.43□□□□□ -1.22
CSDE1-215ENST00000533818 ETV7Q9Y603 341 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms