RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 UBR3Q6ZT12 1888 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 MFAP2P55001 183 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 RPS20P60866 119 aaKnown RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 SHISA5Q8N114 240 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 Q96M66 194 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 PCM1Q15154 2024 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 SCN4AP35499 1836 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 TRBV9A0A0B4J1U6 114 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF205O95201 554 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 HOXA4Q00056 320 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 SRSF9Q13242 221 aaKnown RBP eCLIP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 RTP5Q14D33 572 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 SELENOHQ8IZQ5 122 aaKnown RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 WDR31Q8NA23 367 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 OR8G5Q8NG78 346 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 SMIM8Q96KF7 97 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 PSMG3Q9BT73 122 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 DERL1Q9BUN8 251 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 LHFPL6Q9Y693 200 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF831Q5JPB2 1677 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 TRAV30A0A087WSZ9 112 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 A6NJY4 79 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 TMEM14DPA8MWL7 114 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 PIN1P1O15428 100 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 CD8AP01732 235 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 KIR2DL2P43627 348 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-236ENST00000533667 RUNX1Q01196 453 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 NHLRC3Q5JS37 347 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 IBA57Q5T440 356 aaKnown RBP6.04□□□□□ -1.44
CTNND1-236ENST00000533667 SLC22A18ASQ8N1D0 253 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 OR1P1Q8NH06 330 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 VN1R17PQ8TDU5 208 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 WNT2BQ93097 391 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 AMELYQ99218 206 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 RBKSQ9H477 322 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 G6PC2Q9NQR9 355 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 PLSCR4Q9NRQ2 329 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 JPT1Q9UK76 154 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 HOXA5P20719 270 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 RPL8P62917 257 aaKnown RBP6.04□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF658BQ4V348 819 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-236ENST00000533667 C10orf128Q5T292 105 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 PMCHL2Q9BQD1 86 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 TRAV39A0A0B4J263 110 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 TMEM189A5PLL7 270 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 SCTP09683 121 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 DANCRP0C864 163 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 IL11P20809 199 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 PTGDSP41222 190 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-236ENST00000533667 GAGE1Q13065 139 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 LINC01590Q5TEZ4 76 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 SPANXN1Q5VSR9 72 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 SLC35E4Q6ICL7 350 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 FGFRL1Q8N441 504 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 GPR146Q96CH1 333 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 TUBGCP6Q96RT7 1819 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 A0A1W2PS18 150 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 NDUFB4O95168 129 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 C1QCP02747 245 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 CD40P25942 277 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 HSPE1P61604 102 aaKnown RBP6.04□□□□□ -1.44
CTNND1-236ENST00000533667 PRSS53Q2L4Q9 553 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 FBLN7Q53RD9 439 aa6.04□□□□□ -1.44
CTNND1-236ENST00000533667 IGHV3OR15-7A0A075B7D8 119 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 LDLRAD4O15165 306 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 LINC00869P0C866 280 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 WNT5AP41221 380 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 RAB9AP51151 201 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 ERASQ7Z444 233 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 TEX29Q8N6K0 151 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 OR8A1Q8NGG7 326 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 OR4A5Q8NH83 315 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF488Q96MN9 340 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 CDX2Q99626 313 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-236ENST00000533667 MRPL32Q9BYC8 188 aaKnown RBP6.03□□□□□ -1.44
CTNND1-236ENST00000533667 C5orf66Q9H5L9 145 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 GP6Q9HCN6 339 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF71Q9NQZ8 489 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-236ENST00000533667 DLL3Q9NYJ7 618 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 AMY1AP04745 511 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 GPR6P46095 362 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-236ENST00000533667 SPATA45Q537H7 98 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 TMEM78Q5T7P6 136 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 PRNTQ86SH4 94 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 SPXQ9BT56 116 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 SMOC1Q9H4F8 434 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 FSCN3Q9NQT6 498 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 SPANXCQ9NY87 97 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 IDI2-AS1Q9NZ38 188 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 KCNE5Q9UJ90 142 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 IGKV1D-42A0A075B6H8 117 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 A8MXK9 166 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 BTF3P20290 206 aaKnown RBP6.03□□□□□ -1.44
CTNND1-236ENST00000533667 POC1AQ8NBT0 407 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 HIST1H2BAQ96A08 127 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 MIEN1Q9BRT3 115 aa6.03□□□□□ -1.44
CTNND1-236ENST00000533667 TMEM70Q9BUB7 260 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms