RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 FAM90A14PP0C7W9 464 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 FAM90A24PP0C7X0 464 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 PPIAL4FP0DN26 164 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 KRTDAPP60985 99 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 ZNF385CQ66K41 422 aaPredicted RBP10.56□□□□□ -0.72
RAD50-209ENST00000533482 GGNQ86UU5 652 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 FAM89BQ8N5H3 189 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 LINC01560Q8TB33 94 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 TMEM56Q96MV1 263 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 TXN2Q99757 166 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 RBKSQ9H477 322 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 RPRMQ9NS64 109 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 TNFRSF19Q9NS68 423 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 NAT8Q9UHE5 227 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 TUBD1Q9UJT1 453 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 PPIAL4AQ9Y536 164 aa10.56□□□□□ -0.72
RAD50-209ENST00000533482 MED13Q9UHV7 2174 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 E9PLN8 166 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 CEACAM1P13688 526 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 NPY1RP25929 384 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 KRTCAP3Q53RY4 240 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 BIVMQ86UB2 503 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 TGIF2LYQ8IUE0 185 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 TGIF2LXQ8IUE1 241 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 RAB1CQ92928 201 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 NABP1Q96AH0 204 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 C1QTNF5Q9BXJ0 243 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 PKIBQ9C010 78 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 NAT8BQ9UHF3 227 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 CEP295Q9C0D2 2601 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 IGKV1-27A0A075B6S5 117 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 DUXBA0A1W2PPF3 345 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 MGST3O14880 152 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 ATXN7O15265 892 aaPredicted RBP10.55□□□□□ -0.72
RAD50-209ENST00000533482 CLEC3BP05452 202 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 BPIFB3P59826 476 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 SUPT4H1P63272 117 aaKnown RBP10.55□□□□□ -0.72
RAD50-209ENST00000533482 PMS2P11Q13670 270 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 GABRA6Q16445 453 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 KHDC3LQ587J8 217 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 GALNT14Q96FL9 552 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 RAB1BQ9H0U4 201 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 SH2D2AQ9NP31 389 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
RAD50-209ENST00000533482 SPRR3Q9UBC9 169 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 MIOXQ9UGB7 285 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 BRCA2P51587 3418 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 ODAMA1E959 279 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 KIAA1324LA8MWY0 1029 aaPredicted RBP10.55□□□□□ -0.72
RAD50-209ENST00000533482 F8VVB4 439 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 F8VWA3 439 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 COX5BP10606 129 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 EGR1P18146 543 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 HIST1H3AP68431 136 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 FOXF2Q12947 444 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 TAF15Q92804 592 aaKnown RBP eCLIP10.55□□□□□ -0.72
RAD50-209ENST00000533482 FBLN5Q9UBX5 448 aa10.55□□□□□ -0.72
RAD50-209ENST00000533482 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 PMCHP20382 165 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 CCL1P22362 96 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 UCP3P55916 312 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 PNRC1Q12796 327 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 ACSF3Q4G176 576 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 WDR25Q64LD2 544 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 SPNS3Q6ZMD2 512 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 LINC00470Q9BZP3 86 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 CTXND1A0A1B0GTU2 59 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 J3QR06 171 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 TGOLN2O43493 480 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 TRGC2P03986 189 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 CD1BP29016 333 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 CNN1P51911 297 aaKnown RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 LY6G6EA0A0G2JKS1 128 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 GNG4P50150 75 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 ZNF343Q6P1L6 599 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 ABHD12Q8N2K0 398 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 ZBTB34Q8NCN2 500 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 PNRC2Q9NPJ4 139 aaKnown RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 FOXD3Q9UJU5 478 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 U3KQA8 63 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 FCN1O00602 326 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 SMPD2O60906 423 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 IGHV3-48P01763 117 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 UBE2L3P68036 154 aaKnown RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 PRB3Q04118 309 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 ABLIM2Q6H8Q1 611 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 SIGLECL1Q8N7X8 197 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 OR10A7Q8NGE5 316 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 BCL2L2Q92843 193 aaPredicted RBP10.54□□□□□ -0.72
RAD50-209ENST00000533482 LURAP1Q96LR2 239 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 INSIG2Q9Y5U4 225 aa10.54□□□□□ -0.72
RAD50-209ENST00000533482 C12orf77C9JDV5 145 aa10.53□□□□□ -0.72
RAD50-209ENST00000533482 GAMTQ14353 236 aa10.53□□□□□ -0.72
RAD50-209ENST00000533482 WDFY1Q8IWB7 410 aa10.53□□□□□ -0.72
RAD50-209ENST00000533482 IL22RA2Q969J5 263 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms