RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ZNF708P17019 499 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 SOSTQ9BQB4 213 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 TM2D1Q9BX74 207 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 TLNRD1Q9H1K6 362 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 HILPDAQ9Y5L2 63 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 MPDU1O75352 247 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 CSN3P07498 182 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 MC5RP33032 325 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 GP6Q9HCN6 339 aa15□□□□□ -0.01
PHRF1-205ENST00000533464 ELOA3CA0A087WX78 387 aaPredicted RBP14.99□□□□□ -0.01
PHRF1-205ENST00000533464 LOC102723996A0A087X1L8 192 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 S1PR2O95136 353 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 ERVFRD-1P60508 538 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 TNFRSF9Q07011 255 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 TMEM171Q8WVE6 324 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 GOLT1BQ9Y3E0 138 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 WNT9BO14905 357 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 FOSL1P15407 271 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 SSTR5P35346 364 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 ID4P47928 161 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 RPL8P62917 257 aaKnown RBP14.99□□□□□ -0.01
PHRF1-205ENST00000533464 VWA1Q6PCB0 445 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 DRAM1Q8N682 238 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 NHLRC2Q8NBF2 726 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 SFXN3Q9BWM7 321 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 TMEM140Q9NV12 185 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 FAM90A26D6RGX4 464 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 IGFBP3P17936 291 aaPredicted RBP14.99□□□□□ -0.01
PHRF1-205ENST00000533464 CEACAM18A8MTB9 384 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 J3QRE1 110 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 ZG16O60844 167 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 MEF2BQ02080 365 aaPredicted RBP14.99□□□□□ -0.01
PHRF1-205ENST00000533464 CSRP2Q16527 193 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 SH3BGRL3Q9H299 93 aa14.99□□□□□ -0.01
PHRF1-205ENST00000533464 EIF3GO75821 320 aaKnown RBP eCLIP14.98□□□□□ -0.01
PHRF1-205ENST00000533464 EFNB1P98172 346 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 ECSCRQ19T08 205 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 COX19Q49B96 90 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 POLEQ07864 2286 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 IGSF23A1L1A6 192 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 DNASE2O00115 360 aaPredicted RBP14.98□□□□□ -0.01
PHRF1-205ENST00000533464 RHBDL1O75783 438 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 VAMP3Q15836 100 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 C2orf68Q2NKX9 166 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 HCP5Q6MZN7 132 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 POM121Q96HA1 1249 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 IDI2-AS1Q9NZ38 188 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 LINC00271P0C7V0 271 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 C5orf17Q8NAS9 161 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 SGMS2Q8NHU3 365 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 PAXXQ9BUH6 204 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 IGKV3-7A0A075B6H7 116 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 F5H697 171 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 NDUFB4O95168 129 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 MST1P26927 711 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 IER3P46695 156 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 PTTG1IPP53801 180 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 HLA-DRB5Q30154 266 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 FAM209AQ5JX71 171 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 OR1L6Q8NGR2 347 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 JPT1Q9UK76 154 aa14.98□□□□□ -0.01
PHRF1-205ENST00000533464 SFTPCP11686 197 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 GAS1P54826 345 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 ZNF273Q14593 569 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 MIC13Q5XKP0 118 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 PACRGQ96M98 296 aaPredicted RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 INTS1Q8N201 2190 aaKnown RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 HYPMO75409 117 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 MDKP21741 143 aaPredicted RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 FHITP49789 147 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 ZNRF1Q8ND25 227 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 SPTAN1Q13813 2472 aaKnown RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 PRR19A6NJB7 356 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 HSPB1P04792 205 aaKnown RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 OR5AL1P0C617 328 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 RPL29P47914 159 aaKnown RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 NHLH1Q02575 133 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 C16orf82Q7Z2V1 217 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 TMEM105Q8N8V8 129 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 REPIN1Q9BWE0 567 aaKnown RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 HEATR5BQ9P2D3 2071 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 SNURFLB1AK76 121 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 TNFSF10P50591 281 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 HSPE1P61604 102 aaKnown RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 TMEM183BQ1AE95 376 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 LSM10Q969L4 123 aaKnown RBP14.97□□□□□ -0.01
PHRF1-205ENST00000533464 C1QTNF5Q9BXJ0 243 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 WASHC3Q9Y3C0 194 aa14.97□□□□□ -0.01
PHRF1-205ENST00000533464 CECR9P0C854 216 aa14.96□□□□□ -0.01
PHRF1-205ENST00000533464 LINC00869P0C866 280 aa14.96□□□□□ -0.01
PHRF1-205ENST00000533464 TMPRSS3P57727 454 aa14.96□□□□□ -0.01
PHRF1-205ENST00000533464 LILRB1Q8NHL6 650 aaPredicted RBP14.96□□□□□ -0.01
PHRF1-205ENST00000533464 IL36RNQ9UBH0 155 aa14.96□□□□□ -0.01
PHRF1-205ENST00000533464 NRN1LQ496H8 165 aa14.96□□□□□ -0.01
PHRF1-205ENST00000533464 ARTNQ5T4W7 220 aa14.96□□□□□ -0.01
PHRF1-205ENST00000533464 TRAV34A0A0B4J273 112 aa14.96□□□□□ -0.02
PHRF1-205ENST00000533464 SMPD2O60906 423 aa14.96□□□□□ -0.02
PHRF1-205ENST00000533464 VKORC1L1Q8N0U8 176 aa14.96□□□□□ -0.02
PHRF1-205ENST00000533464 TRPM7Q96QT4 1865 aa14.95□□□□□ -0.02
PHRF1-205ENST00000533464 MSGN1A6NI15 193 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms