RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 UBE2J1Q9Y385 318 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 LINC00312Q9Y6C7 94 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 DNAH9Q9NYC9 4486 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 TRBV23-1A0A0A0MS06 115 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 FAM172BPA6NC97 362 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 ZNF729A6NN14 1252 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 NPIPB11E5RHQ5 1161 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 F2RL2O00254 374 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 CHST1O43916 411 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 PPYP01298 95 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 LYL1P12980 280 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 ANXA7P20073 488 aaKnown RBP9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 ZBTB25P24278 435 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 FXYD4P59646 89 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 HERV-K104P61576 105 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 HTD2P86397 168 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 CD83Q01151 205 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 KLRD1Q13241 179 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 HABP2Q14520 560 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 ZNF273Q14593 569 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 LTC4SQ16873 150 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 Q8N7P7 452 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 C8orf46Q8TAG6 207 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 TNFRSF14Q92956 283 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 MOB3AQ96BX8 217 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 WNT10AQ9GZT5 417 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 METTL8Q9H825 291 aaKnown RBP9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 LINC00574Q9H8X3 128 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 RAB9BQ9NP90 201 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 OR2S2Q9NQN1 319 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 IDI2-AS1Q9NZ38 188 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 SLC23A1Q9UHI7 598 aa9.05□□□□□ -0.96
TRAPPC4-213ENST00000533149 IGHV3-43A0A0B4J1X8 118 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 ZNF728P0DKX0 622 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 IGHV3-43DP0DP04 118 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 CCL3L1P16619 93 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 PI3P19957 117 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 ECI1P42126 302 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 MECP2P51608 486 aaKnown RBP9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 UCP3P55916 312 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 GNMTQ14749 295 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 SURF2Q15527 256 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 TMED4Q7Z7H5 227 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 OR10V1Q8NGI7 309 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 TOMM40LQ969M1 308 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 RTBDNQ9BSG5 229 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 PRSS22Q9GZN4 317 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 TOLLIPQ9H0E2 274 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 PARP12Q9H0J9 701 aaKnown RBP9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 FXYD6Q9H0Q3 95 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 ALX4Q9H161 411 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 GAR1Q9NY12 217 aaKnown RBP9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 RDH8Q9NYR8 311 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 OR2W1Q9Y3N9 320 aa9.04□□□□□ -0.96
TRAPPC4-213ENST00000533149 A0A0B4J293 547 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 IGKV1D-13A0A0B4J2D9 117 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 M0R1W7 72 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 MMP23AO75900 390 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 IL5P05113 134 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 IGKV1-13P0DP09 117 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 PPP1CCP36873 323 aaKnown RBP9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 LUMP51884 338 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 DLX1P56177 255 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 DLX6P56179 175 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 ERVFRD-1P60508 538 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 TATDN3Q17R31 274 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 MORN2Q502X0 79 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 ARSJQ5FYB0 599 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 PRAMEF5Q5TYX0 476 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 SLC25A42Q86VD7 318 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 ADAD2Q8NCV1 583 aaKnown RBP9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 OR5AU1Q8NGC0 362 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 ZNF714Q96N38 554 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 MCRIP2Q9BUT9 160 aaKnown RBP9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 SLC5A7Q9GZV3 580 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 GAL3ST2Q9H3Q3 398 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 GNG12Q9UBI6 72 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 ALG5Q9Y673 324 aa9.03□□□□□ -0.96
TRAPPC4-213ENST00000533149 YPEL1O60688 119 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 PRAF2O60831 178 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR8U9P0C7N5 309 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 NFYBP25208 207 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 LPCAT3Q6P1A2 487 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 HEPN1Q6WQI6 88 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 GLDNQ6ZMI3 551 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 SLC38A6Q8IZM9 456 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 CADM3Q8N126 398 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR10A7Q8NGE5 316 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR52M1Q8NGK5 317 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 OR8U1Q8NH10 309 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 SECTM1Q8WVN6 248 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 C17orf50Q8WW18 174 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 YPEL2Q96QA6 119 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 SEC22CQ9BRL7 303 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 RSRP1Q9BUV0 290 aa9.02□□□□□ -0.97
TRAPPC4-213ENST00000533149 CCL28Q9NRJ3 127 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms