RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MPDZO75970 2070 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 UCNP55089 124 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 SLC35E4Q6ICL7 350 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 ZNF880Q6PDB4 577 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 ZIC4Q8N9L1 334 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 OR1B1Q8NGR6 318 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 JPT1Q9UK76 154 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 PHF3Q92576 2039 aaKnown RBP13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 PLXNA2O75051 1894 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 KIAA1324LA8MWY0 1029 aaPredicted RBP13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 FAM157AC9JC47 383 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 PLAURQ03405 335 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 HEXA-AS1Q9H8Q6 139 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 NBASA2RRP1 2371 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 LRRC3CA6NJW4 275 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 CCL21O00585 134 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 FHL1Q13642 323 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 SFXN3Q9BWM7 321 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 S1PR2O95136 353 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 FAM157CP0CG43 387 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 IQCJQ1A5X6 159 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 VWA1Q6PCB0 445 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 LDLRAD3Q86YD5 345 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 WBP1Q96G27 269 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 WDR61Q9GZS3 305 aaKnown RBP13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 FOXD3Q9UJU5 478 aaPredicted RBP13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 PXMP4Q9Y6I8 212 aa13.05□□□□□ -0.32
PCDHA3-202ENST00000532566 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 PGA5P0DJD9 388 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 MPZP25189 248 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 FHITP49789 147 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 RND3P61587 244 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 PQLC2LA1A4F0 135 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 CECR9P0C854 216 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 PMS2P11Q13670 270 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 WDR73Q6P4I2 378 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 OR4X1Q8NH49 305 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 SMIM8Q96KF7 97 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 SNRNP200O75643 2136 aaKnown RBP13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 WNT9BO14905 357 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 NEURL1O76050 574 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 PMCHP20382 165 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 NSUN5P2Q63ZY6 315 aa13.04□□□□□ -0.32
PCDHA3-202ENST00000532566 FAM166AQ6J272 317 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 OR4A8P0C604 315 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 CRYGSP22914 178 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 SSTR5P35346 364 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 C1orf162Q8NEQ5 155 aaPredicted RBP13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 MS4A10Q96PG2 267 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 SCN8AQ9UQD0 1980 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 IFNL4K9M1U5 179 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 ZG16O60844 167 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 NAT1P18440 290 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 GLRXP35754 106 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 PSG7Q13046 419 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 SPNS3Q6ZMD2 512 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 A0A0A6YYD4 124 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 A8MXK9 166 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 SMIM6P0DI80 62 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 SUMO1P63165 101 aaKnown RBP13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 TIMM23BQ5SRD1 257 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
PCDHA3-202ENST00000532566 HELTA6NFD8 242 aa13.02□□□□□ -0.32
PCDHA3-202ENST00000532566 CDK2AP1O14519 115 aa13.02□□□□□ -0.32
PCDHA3-202ENST00000532566 LDLRAD4O15165 306 aa13.02□□□□□ -0.32
PCDHA3-202ENST00000532566 NOL4LQ96MY1 436 aaPredicted RBP13.02□□□□□ -0.32
PCDHA3-202ENST00000532566 TMEM140Q9NV12 185 aa13.02□□□□□ -0.32
PCDHA3-202ENST00000532566 C12orf77C9JDV5 145 aa13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 COX19Q49B96 90 aa13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 C10orf113Q5VZT2 155 aa13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 TOMM20LQ6UXN7 152 aa13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 NABP1Q96AH0 204 aa13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 HELZP42694 1942 aaKnown RBP13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 IGSF23A1L1A6 192 aa13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 IL36RNQ9UBH0 155 aa13.02□□□□□ -0.33
PCDHA3-202ENST00000532566 PINLYPA6NC86 204 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 CYB5R3P00387 301 aaPredicted RBP13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 RTP5Q14D33 572 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 IDI2-AS1Q9NZ38 188 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 C1RLQ9NZP8 487 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 POLEQ07864 2286 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 H0YL77 283 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 GNG7O60262 68 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 CRISP2P16562 243 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 IGHV1-2P23083 117 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 BRS3P32247 399 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 HSPE1P61604 102 aaKnown RBP13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 TXNDC17Q9BRA2 123 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 AKAP6Q13023 2319 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 MC5RP33032 325 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 TCL1AP56279 114 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 GGNQ86UU5 652 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 PERPQ96FX8 193 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms