RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ENY2Q9NPA8 101 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 DNAJB12Q9NXW2 375 aaKnown RBP5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 ZGRF1Q86YA3 2104 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF462Q96JM2 2506 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 IGHV3-15A0A0B4J1V0 119 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 LINC01590Q5TEZ4 76 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 NT5CQ8TCD5 201 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 SPTSSAQ969W0 71 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 TSPAN32Q96QS1 320 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 DLL3Q9NYJ7 618 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 MTCH1Q9NZJ7 389 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF835Q9Y2P0 537 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 MRPS16Q9Y3D3 137 aaKnown RBP5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 FANCMQ8IYD8 2048 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 TEX50A0A1B0GTY4 177 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 SLC22A20A6NK97 555 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 MPPED1O15442 326 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 ESDP10768 282 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 SLC25A6P12236 298 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 CD46P15529 392 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 ARR3P36575 388 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 RRADP55042 308 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 CBLN3Q6UW01 205 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 BCORP1Q8N888 145 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 YTHDF2Q9Y5A9 579 aaKnown RBP5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 CFAP47Q6ZTR5 3102 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 IGHV2-70DA0A0C4DH43 119 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 KIR2DS1A0A191URI9 304 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 A0A1W2PR80 420 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 TGFBR3LH3BV60 316 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CRYAAP02489 173 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 HIST1H1EP10412 219 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 HTR1DP28221 377 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 KIR2DS4P43632 304 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CEBPDP49716 269 aaPredicted RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 SOX8P57073 446 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 RPS4XP62701 263 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 GNB2P62879 340 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 KIR2DS1Q14954 304 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 KISS1Q15726 138 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 MRPL54Q6P161 138 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 LYPD6BQ8NI32 183 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 FLVCR1-AS1Q8TAF5 88 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 AMELYQ99218 206 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 HEATR5AQ86XA9 2040 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CADP27708 2225 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CENPEQ02224 2701 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 TRAV9-2A0A087WT02 112 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 A0A087WV48 116 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 IGSF23A1L1A6 192 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 NDUFB4O95168 129 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 VAMP5O95183 116 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF205O95201 554 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 PFN1P07737 140 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ADMP35318 185 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 TCL1AP56279 114 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 SELENOVP59797 346 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 OR1C1Q15619 314 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 WIPI1Q5MNZ9 446 aaPredicted RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CDCP2Q5VXM1 449 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 DNM1P46Q6ZS02 220 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 SELENOHQ8IZQ5 122 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ZADH2Q8N4Q0 377 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ABHD14BQ96IU4 210 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ODAMA1E959 279 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 SYNGR2O43760 224 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 NEURL1O76050 574 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CTXN2P0C2S0 81 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ERGP11308 486 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CTLA4P16410 223 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 UBE2G1P62253 170 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 KIAA1644Q3SXP7 199 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF658BQ4V348 819 aaPredicted RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 CXorf66Q5JRM2 361 aaPredicted RBP5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 PLCXD3Q63HM9 321 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 C5orf24Q7Z6I8 188 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 WFDC8Q8IUA0 241 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 OR5A2Q8NGI9 324 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 OR1N2Q8NGR9 330 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 ST6GALNAC6Q969X2 333 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 RAB37Q96AX2 223 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 PLEK2Q9NYT0 353 aa5.84□□□□□ -1.47
TGFBR3-209ENST00000532540 DENND4CQ5VZ89 1909 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 TMED7-TICAM2A0A0A6YYA0 188 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 TRBV9A0A0B4J1U6 114 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 OR5B21A6NL26 309 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 FAM157AC9JC47 383 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 HYPMO75409 117 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 SCGB2A1O75556 95 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 CA2P00918 260 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 IGHG1P01857 330 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 APCSP02743 223 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 ZNF883P0CG24 379 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 IGLC2P0DOY2 106 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 IGLC3P0DOY3 106 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 SRIP30626 198 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 MC5RP33032 325 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 GPM6AP51674 278 aa5.83□□□□□ -1.48
TGFBR3-209ENST00000532540 FDX2Q6P4F2 183 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms