RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 REG1BP48304 166 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 CTBP2P56545 445 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 SNAP25P60880 206 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 MAGOHP61326 146 aaKnown RBP1.47□□□□□ -2.17
CD44-234ENST00000531873 GNA13Q14344 377 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 FAM229BQ4G0N7 80 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 MRPL51Q4U2R6 128 aaKnown RBP1.47□□□□□ -2.17
CD44-234ENST00000531873 PYDC2Q56P42 97 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 TNFAIP8L2Q6P589 184 aaPredicted RBP1.47□□□□□ -2.17
CD44-234ENST00000531873 COMMD7Q86VX2 200 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 C10orf67Q8IYJ2 551 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 DEFB123Q8N688 67 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 NATD1Q8N6N6 113 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 ZNF565Q8N9K5 539 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 TMEM161BQ8NDZ6 487 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 GPR32P1Q8NGA4 272 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 OR10P1Q8NGE3 313 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 OR10D4PQ8NGN7 298 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 LMX1AQ8TE12 382 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 Q8WTZ3 238 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 OR5P3Q8WZ94 311 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 TMBIM1Q969X1 311 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 TESCQ96BS2 214 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 OR8B2Q96RD0 313 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 UPK3BQ9BT76 320 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 BCL2L14Q9BZR8 327 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 DNAJC12Q9UKB3 198 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 VPREB3Q9UKI3 123 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 ALG5Q9Y673 324 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 CHD6Q8TD26 2715 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 HEATR5AQ86XA9 2040 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 UTRNP46939 3433 aa1.47□□□□□ -2.17
CD44-234ENST00000531873 PCNTO95613 3336 aa1.46□□□□□ -2.17
CD44-234ENST00000531873 CDK13Q14004 1512 aaKnown RBP1.46□□□□□ -2.18
CD44-234ENST00000531873 RAPGEF2Q9Y4G8 1499 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 USP9XQ93008 2570 aaPredicted RBP1.46□□□□□ -2.18
CD44-234ENST00000531873 IGLV10-54A0A075B6I4 117 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 TMED7-TICAM2A0A0A6YYA0 188 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 C19orf71A6NCJ1 209 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 C17orf98A8MV24 154 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 M0R381 172 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 CRTAPO75718 401 aaPredicted RBP1.46□□□□□ -2.18
CD44-234ENST00000531873 IFNA5P01569 189 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 IGLV6-57P01721 117 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 ISG15P05161 165 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 CRYGDP07320 174 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 CD36P16671 472 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 CA7P43166 264 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 NKX2-5P52952 324 aaPredicted RBP1.46□□□□□ -2.18
CD44-234ENST00000531873 TSPEAR-AS2P59090 65 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 HLA-DRB3P79483 266 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 EBPQ15125 230 aaKnown RBP1.46□□□□□ -2.18
CD44-234ENST00000531873 IMPG1Q17R60 797 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 SPIN3Q5JUX0 258 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 OGFRL1Q5TC84 451 aaPredicted RBP1.46□□□□□ -2.18
CD44-234ENST00000531873 CD200R1LQ6Q8B3 271 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 SDIM1Q6ZPB5 146 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 C1orf174Q8IYL3 243 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 DNAAF3Q8N9W5 541 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 CCDC112Q8NEF3 446 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 MFSD8Q8NHS3 518 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 TVP23CQ96ET8 276 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 C11orf1Q9H5F2 150 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 DKKL1Q9UK85 242 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 POLR1DQ9Y2S0 133 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 FIS1Q9Y3D6 152 aa1.46□□□□□ -2.18
CD44-234ENST00000531873 DCAF1Q9Y4B6 1507 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 THSD7AQ9UPZ6 1657 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 LRRC9Q6ZRR7 1453 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 C5orf49A4QMS7 147 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 LINC00862A6NCI5 91 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 A8MWP6 167 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 SYNGR2O43760 224 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 S100A6P06703 90 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 SERPINA6P08185 405 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 CD7P09564 240 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 NQO1P15559 274 aaKnown RBP1.45□□□□□ -2.18
CD44-234ENST00000531873 ZNF7P17097 686 aaPredicted RBP1.45□□□□□ -2.18
CD44-234ENST00000531873 CRYBB3P26998 211 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 AKR1C2P52895 323 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 SLC35A2P78381 396 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 DEFB115Q30KQ5 88 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 TMEM31Q5JXX7 168 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 CLVS2Q5SYC1 327 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 C1orf194Q5T5A4 169 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 N4BP2L1Q5TBK1 243 aaPredicted RBP1.45□□□□□ -2.18
CD44-234ENST00000531873 C1orf195Q5TG92 126 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 SFXN4Q6P4A7 337 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 CALHM3Q86XJ0 350 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 MSRB3Q8IXL7 192 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 TBX5Q99593 518 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 HIGD2AQ9BW72 106 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 UCK1Q9HA47 277 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 HES4Q9HCC6 221 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 HRASLSQ9HDD0 168 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 XPNPEP1Q9NQW7 623 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 C3orf18Q9UK00 162 aa1.45□□□□□ -2.18
CD44-234ENST00000531873 PCYT1BQ9Y5K3 369 aaPredicted RBP1.45□□□□□ -2.18
CD44-234ENST00000531873 MYO16Q9Y6X6 1858 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms