RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 GPR82Q96P67 336 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 GPER1Q99527 375 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 TBX5Q99593 518 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 AIF1LQ9BQI0 150 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 SHANK2-AS3Q9BTD1 123 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF286AQ9HBT8 521 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 GPR84Q9NQS5 396 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 DAZ1Q9NQZ3 744 aaKnown RBP2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 SLC35A3Q9Y2D2 325 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 UTP11Q9Y3A2 253 aaKnown RBP2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 MRPS16Q9Y3D3 137 aaKnown RBP2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 KIF25-AS1Q9Y6Z4 181 aa2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 MTCL1Q9Y4B5 1905 aaKnown RBP2.87□□□□□ -1.95
AC055878.1-201ENST00000531858 TMEM131Q92545 1883 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 THSD7AQ9UPZ6 1657 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 VWA8A3KMH1 1905 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 IGLL5B9A064 214 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 C11orf94C9JXX5 98 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 AIPO00170 330 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 RBFOX2O43251 390 aaKnown RBP eCLIP2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 ORC5O43913 435 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 GYPCP04921 128 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 HLA-DQB2P05538 268 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 C8GP07360 202 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 CISD3P0C7P0 127 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF823P16415 610 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 MPV17P39210 176 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 RPS10P46783 165 aaKnown RBP2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 NOVP48745 357 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 GTF2A1P52655 376 aaPredicted RBP2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 RHOBP62745 196 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 FKBP1AP62942 108 aaKnown RBP2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 GNA12Q03113 381 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 APOFQ13790 326 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 SMCO1Q147U7 214 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 C12orf74Q32Q52 190 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 TMEM78Q5T7P6 136 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 Q5W150 140 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 GLT8D1Q68CQ7 371 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 Q6ZR03 302 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 LINC01551Q86U37 167 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 C11orf42Q8N5U0 333 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 ANKRD29Q8N6D5 301 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 OR10J5Q8NHC4 309 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 ITLN2Q8WWU7 325 aaPredicted RBP2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 PHYHIPLQ96FC7 376 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 PYGO2Q9BRQ0 406 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 C1orf50Q9BV19 199 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 RWDD2AQ9UIY3 292 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 PRNDQ9UKY0 176 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 TMEM56-RWDD3S4R434 201 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 CPDO75976 1380 aa2.86□□□□□ -1.95
AC055878.1-201ENST00000531858 HCFC1P51610 2035 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 TRAPPC13A5PLN9 417 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 PRORSD1PA6NEY8 169 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF850A8MQ14 1090 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 ALDH3A1P30838 453 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 PHBP35232 272 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF133P52736 654 aaPredicted RBP2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 TAS2R45P59539 299 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 CST6Q15828 149 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 DEFB116Q30KQ4 102 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 KLHL12Q53G59 568 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 BAP18Q8IXM2 172 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 MKXQ8IYA7 352 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF101Q8IZC7 436 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 UMODL1-AS1Q8N2C9 162 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 C3orf22Q8N5N4 141 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 OR10K1Q8NGX5 313 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 OR2T4Q8NH00 348 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 STARD4Q96DR4 205 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 TMEM147Q9BVK8 224 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 RNASE7Q9H1E1 156 aaKnown RBP2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 WFDC1Q9HC57 220 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 UQCC1Q9NVA1 299 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 SPANXCQ9NY87 97 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 TBX21Q9UL17 535 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 GINS2Q9Y248 185 aa2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 SETD1AO15047 1707 aaKnown RBP2.85□□□□□ -1.95
AC055878.1-201ENST00000531858 RAI1Q7Z5J4 1906 aaPredicted RBP2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 G3V2T6 193 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 PIRO00625 290 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF861PO60384 105 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF682O95780 498 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 CRYZL1O95825 349 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 LHBP01229 141 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 LGALS1P09382 135 aaKnown RBP2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 RBP1P09455 135 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 NTF3P20783 257 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 PPIBP23284 216 aaKnown RBP2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 S100GP29377 79 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 ERP29P30040 261 aaKnown RBP2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 DAPP51397 102 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 ZNF140P52738 457 aaPredicted RBP2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 GRK1Q15835 563 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 KCNJ8Q15842 424 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 DCUN1D2Q6PH85 259 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms