RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CD24P25063 80 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 TSPAN5P62079 268 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 KLF9Q13886 244 aaPredicted RBP11.56□□□□□ -0.56
CPSF1-206ENST00000531480 Q8N2B8 174 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 ARRDC1Q8N5I2 433 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 DUSP18Q8NEJ0 188 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 OR5AN1Q8NGI8 311 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 OR8U1Q8NH10 309 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 MRPL20Q9BYC9 149 aaKnown RBP11.56□□□□□ -0.56
CPSF1-206ENST00000531480 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 C16orf95Q9H693 158 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 RANBP3Q9H6Z4 567 aaPredicted RBP11.56□□□□□ -0.56
CPSF1-206ENST00000531480 SDHAF2Q9NX18 166 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 ZNF221Q9UK13 617 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 RNF150Q9ULK6 438 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 MMP24Q9Y5R2 645 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 SLC22A5O76082 557 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 IGKV1D-33P01593 117 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 IGKV1-33P01594 117 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 CD74P04233 296 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 AMY1AP04745 511 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 AMY2AP04746 511 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 FCGR2CP31995 323 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 HRH1P35367 487 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 GPR12P47775 334 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 RFX2P48378 723 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 LUMP51884 338 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-206ENST00000531480 EIF4EBP1Q13541 118 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-206ENST00000531480 OXA1LQ15070 435 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 RNASE12Q5GAN4 147 aaKnown RBP11.55□□□□□ -0.56
CPSF1-206ENST00000531480 VAX1Q5SQQ9 334 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 DHRS7BQ6IAN0 325 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-206ENST00000531480 Q6ZSV7 163 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 MOB3BQ86TA1 216 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 ZNF645Q8N7E2 425 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 EAF1Q96JC9 268 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-206ENST00000531480 NUBP2Q9Y5Y2 271 aa11.55□□□□□ -0.56
CPSF1-206ENST00000531480 OR5H14A6NHG9 310 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 H0YJW9 148 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 MOSP00540 346 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 PPYP01298 95 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 FCER2P06734 321 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 AADACP22760 399 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 HLA-DMAP28067 261 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 RAG2P55895 527 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 RBMS2Q15434 407 aaKnown RBP11.54□□□□□ -0.56
CPSF1-206ENST00000531480 CENPSQ8N2Z9 138 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 CAPSLQ8WWF8 208 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 DDB2Q92466 427 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 SLC25A33Q9BSK2 321 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 HRASLSQ9HDD0 168 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 PLSCR3Q9NRY6 295 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 EHFQ9NZC4 300 aa11.54□□□□□ -0.56
CPSF1-206ENST00000531480 IGHV3-72A0A0B4J1Y9 119 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 M0QZK8 103 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 FGF16O43320 207 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 PMP2P02689 132 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 CRYBA1P05813 215 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 S100GP29377 79 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 SLC6A1P30531 599 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 MC5RP33032 325 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 IFITM3Q01628 133 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 FOXL1Q12952 345 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 LPCAT3Q6P1A2 487 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 ZNF383Q8NA42 475 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 OR8H1Q8NGG4 311 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 OR6F1Q8NGZ6 308 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 AKR1E2Q96JD6 320 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 NPFFR1Q9GZQ6 430 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 TBC1D24Q9ULP9 559 aa11.53□□□□□ -0.56
CPSF1-206ENST00000531480 A0A1B0GUS0 222 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 HAX1O00165 279 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 PLA2G10O15496 165 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 CD3DP04234 171 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 TMEM11P17152 192 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.57
CPSF1-206ENST00000531480 TAGLNQ01995 201 aaKnown RBP11.52□□□□□ -0.57
CPSF1-206ENST00000531480 NRARPQ7Z6K4 114 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 OR4F5Q8NH21 305 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 LINC01006Q8NI28 216 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 TAF15Q92804 592 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPSF1-206ENST00000531480 ADTRPQ96IZ2 230 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 RNF5Q99942 180 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 SLC2A8Q9NY64 477 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 MOB4Q9Y3A3 225 aa11.52□□□□□ -0.57
CPSF1-206ENST00000531480 M0R1X1 148 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 PRAF2O60831 178 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 THBS3P49746 956 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 LINC00205P59089 165 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 BLCAPP62952 87 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 LHFPL1Q86WI0 220 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 PDPNQ86YL7 162 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 Q8N9W7 124 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms