RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 LGALS9O00182 355 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 ATP5HO75947 161 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 S1PR2O95136 353 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 CDRT1O95170 752 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 HLA-AP01891 365 aaKnown RBP6.01□□□□□ -1.45
CD44-232ENST00000531118 AMBPP02760 352 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 MAS1P04201 325 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 T-ENOLP0DO92 83 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 RAP2AP10114 183 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 SERPINA2P20848 420 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 CBLN1P23435 193 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 CRISP1P54107 249 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 RHOGP84095 191 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 ZNF85Q03923 595 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 LY6G6FQ5SQ64 297 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 C6orf141Q5SZD1 244 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 PVRIGQ6DKI7 326 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 DMKNQ6E0U4 476 aaPredicted RBP6.01□□□□□ -1.45
CD44-232ENST00000531118 ASCL4Q6XD76 172 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 C5orf24Q7Z6I8 188 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 FAM223AQ8IWN6 122 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 ADAD2Q8NCV1 583 aaKnown RBP6.01□□□□□ -1.45
CD44-232ENST00000531118 OR5AN1Q8NGI8 311 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 OR51A2Q8NGJ7 313 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 OR52N1Q8NH53 320 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 TMEM163Q8TC26 289 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 CCDC124Q96CT7 223 aaKnown RBP6.01□□□□□ -1.45
CD44-232ENST00000531118 TSNAXQ99598 290 aaKnown RBP6.01□□□□□ -1.45
CD44-232ENST00000531118 RNF5Q99942 180 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 RARRES2Q99969 163 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 MAP6D1Q9H9H5 199 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 AKIP1Q9NQ31 210 aa6.01□□□□□ -1.45
CD44-232ENST00000531118 H2AFY2Q9P0M6 372 aaPredicted RBP6.01□□□□□ -1.45
CD44-232ENST00000531118 A0A1W2PP11 408 aa6□□□□□ -1.45
CD44-232ENST00000531118 AQP12BA6NM10 295 aa6□□□□□ -1.45
CD44-232ENST00000531118 DEFB4AO15263 64 aa6□□□□□ -1.45
CD44-232ENST00000531118 YPEL1O60688 119 aa6□□□□□ -1.45
CD44-232ENST00000531118 CST1P01037 141 aa6□□□□□ -1.45
CD44-232ENST00000531118 IGKV1-16P04430 117 aa6□□□□□ -1.45
CD44-232ENST00000531118 HTR1AP08908 422 aa6□□□□□ -1.45
CD44-232ENST00000531118 APELAP0DMC3 54 aa6□□□□□ -1.45
CD44-232ENST00000531118 CPEP16870 476 aa6□□□□□ -1.45
CD44-232ENST00000531118 MC5RP33032 325 aa6□□□□□ -1.45
CD44-232ENST00000531118 MAP2K4P45985 399 aa6□□□□□ -1.45
CD44-232ENST00000531118 HTD2P86397 168 aa6□□□□□ -1.45
CD44-232ENST00000531118 PJVKQ0ZLH3 352 aa6□□□□□ -1.45
CD44-232ENST00000531118 FLOT2Q14254 428 aa6□□□□□ -1.45
CD44-232ENST00000531118 MED22Q15528 200 aa6□□□□□ -1.45
CD44-232ENST00000531118 SOHLH1Q5JUK2 328 aa6□□□□□ -1.45
CD44-232ENST00000531118 Q6ZR54 194 aa6□□□□□ -1.45
CD44-232ENST00000531118 SERPINA12Q8IW75 414 aa6□□□□□ -1.45
CD44-232ENST00000531118 AQP12AQ8IXF9 295 aa6□□□□□ -1.45
CD44-232ENST00000531118 PARP16Q8N5Y8 322 aa6□□□□□ -1.45
CD44-232ENST00000531118 UXS1Q8NBZ7 420 aa6□□□□□ -1.45
CD44-232ENST00000531118 CHAC2Q8WUX2 184 aa6□□□□□ -1.45
CD44-232ENST00000531118 CYYR1Q96J86 154 aa6□□□□□ -1.45
CD44-232ENST00000531118 YPEL2Q96QA6 119 aa6□□□□□ -1.45
CD44-232ENST00000531118 PHB2Q99623 299 aa6□□□□□ -1.45
CD44-232ENST00000531118 RNF126Q9BV68 326 aa6□□□□□ -1.45
CD44-232ENST00000531118 ALG8Q9BVK2 526 aa6□□□□□ -1.45
CD44-232ENST00000531118 METTL9Q9H1A3 318 aa6□□□□□ -1.45
CD44-232ENST00000531118 SPACA1Q9HBV2 294 aa6□□□□□ -1.45
CD44-232ENST00000531118 PIPOXQ9P0Z9 390 aa6□□□□□ -1.45
CD44-232ENST00000531118 WARS2Q9UGM6 360 aaKnown RBP6□□□□□ -1.45
CD44-232ENST00000531118 DMRT1Q9Y5R6 373 aa6□□□□□ -1.45
CD44-232ENST00000531118 TRAV10A0A0B4J240 114 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 TRAV25A0A0B4J276 109 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 OR4C45A6NMZ5 311 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 RAB29O14966 203 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 GGCTO75223 188 aaKnown RBP5.99□□□□□ -1.45
CD44-232ENST00000531118 SC5DO75845 299 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 PRH1P02810 166 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 OR9G9P0C7N8 305 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 P0DMU3 169 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 FAM231AP0DMU4 169 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 FAM231CP0DMU5 169 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 ANXA8P13928 327 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 RAB3AP20336 220 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 PRKACGP22612 351 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 CCR9P51686 369 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 MS4A2Q01362 244 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 ATP5G2Q06055 141 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 PTGES3Q15185 160 aaKnown RBP5.99□□□□□ -1.45
CD44-232ENST00000531118 RBPMS2Q6ZRY4 209 aaKnown RBP5.99□□□□□ -1.45
CD44-232ENST00000531118 Q6ZTC4 211 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 ZNF554Q86TJ5 538 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 SPATA24Q86W54 205 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 SLC38A6Q8IZM9 456 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 OR2C3Q8N628 320 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 OR5D14Q8NGL3 314 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 OR11H2Q8NH07 326 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 PELI1Q96FA3 418 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 GALNT14Q96FL9 552 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 C16orf92Q96LL3 132 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 SPAG8Q99932 426 aaPredicted RBP5.99□□□□□ -1.45
CD44-232ENST00000531118 HRH4Q9H3N8 390 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 TAS2R4Q9NYW5 299 aa5.99□□□□□ -1.45
CD44-232ENST00000531118 IGLV2-18A0A075B6J9 118 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 TRBV9A0A0B4J1U6 114 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 MCRIP1C9JLW8 97 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms