RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 TNFRSF9Q07011 255 aa12.77□□□□□ -0.37
LRP5-206ENST00000529993 RTP5Q14D33 572 aa12.77□□□□□ -0.37
LRP5-206ENST00000529993 FA2HQ7L5A8 372 aa12.77□□□□□ -0.37
LRP5-206ENST00000529993 MARCH11A6NNE9 402 aa12.77□□□□□ -0.37
LRP5-206ENST00000529993 CYB5R3P00387 301 aaPredicted RBP12.77□□□□□ -0.37
LRP5-206ENST00000529993 WDR25Q64LD2 544 aaPredicted RBP12.77□□□□□ -0.37
LRP5-206ENST00000529993 DPPA3Q6W0C5 159 aa12.77□□□□□ -0.37
LRP5-206ENST00000529993 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
LRP5-206ENST00000529993 ELOA3CA0A087WX78 387 aaPredicted RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 ZNF735P0CB33 412 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 NAT2P11245 290 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 ZNF383Q8NA42 475 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 HSPB1P04792 205 aaKnown RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 OR10J1P30954 320 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 FAM3BP58499 235 aaPredicted RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 DEPPQ9NTK1 212 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 PHF3Q92576 2039 aaKnown RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 NAT1P18440 290 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 FAM162BQ5T6X4 162 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 RAB24Q969Q5 203 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 CALYQ9NYX4 217 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 MPDZO75970 2070 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 PLAUP00749 431 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 ACP1P24666 158 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 CEACAM3P40198 252 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 SPCS3P61009 180 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 VWA1Q6PCB0 445 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 ZNRF1Q8ND25 227 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 MARS2Q96GW9 593 aaKnown RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 ASCL3Q9NQ33 180 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 PI4KAP42356 2102 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 SNURFLB1AK76 121 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 HTR1DP28221 377 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 HNRNPA3P51991 378 aaKnown RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 C10orf113Q5VZT2 155 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 KLHDC1Q8N7A1 406 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 LINC00470Q9BZP3 86 aa12.76□□□□□ -0.37
LRP5-206ENST00000529993 WDR61Q9GZS3 305 aaKnown RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
LRP5-206ENST00000529993 CLPSP04118 112 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 RANP62826 216 aaKnown RBP12.75□□□□□ -0.37
LRP5-206ENST00000529993 ABHD12Q8N2K0 398 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 TGIF2-C20orf24A0A0A6YYL0 155 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 A8MXK9 166 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 CDK2AP1O14519 115 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 USF1P22415 310 aaPredicted RBP12.75□□□□□ -0.37
LRP5-206ENST00000529993 OR8B3Q8NGG8 313 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 OR8B2Q96RD0 313 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 LRRC3CA6NJW4 275 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 H0YIZ8 118 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 KLF7O75840 302 aaPredicted RBP12.75□□□□□ -0.37
LRP5-206ENST00000529993 REPIN1Q9BWE0 567 aaKnown RBP12.75□□□□□ -0.37
LRP5-206ENST00000529993 A0A087X0M5 115 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 A0A1B0GX30 115 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 GNG7O60262 68 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 PTBP3O95758 552 aaKnown RBP12.75□□□□□ -0.37
LRP5-206ENST00000529993 MMDQ15546 238 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 TMEM45BQ96B21 275 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 TMEM140Q9NV12 185 aa12.75□□□□□ -0.37
LRP5-206ENST00000529993 CELA3BP08861 270 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 PGA5P0DJD9 388 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 S100A4P26447 101 aaKnown RBP12.74□□□□□ -0.37
LRP5-206ENST00000529993 FGFBP3Q8TAT2 258 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 FGF11Q92914 225 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 KCNMB2Q9Y691 235 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 PAX6P26367 422 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 HCP5Q6MZN7 132 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 C11orf42Q8N5U0 333 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 PRR7Q8TB68 274 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 GALNT14Q96FL9 552 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 C1QTNF5Q9BXJ0 243 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 LOC102723996A0A087X1L8 192 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 OR2J3O76001 311 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 EGR1P18146 543 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 WDR73Q6P4I2 378 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 RNF144BQ7Z419 303 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 PCGF1Q9BSM1 259 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 OR4A8P0C604 315 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 VAMP3Q15836 100 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 FAM122AQ96E09 287 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 POM121Q96HA1 1249 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 THYN1Q9P016 225 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 PITPNC1Q9UKF7 332 aa12.74□□□□□ -0.37
LRP5-206ENST00000529993 PKDREJQ9NTG1 2253 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 HLA-DRB5Q30154 266 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 FAM201AQ5SY85 155 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 PRSS3P2Q8NHM4 247 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 RNF2Q99496 336 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 LPAR2Q9HBW0 351 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 CLEC5AQ9NY25 188 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 C5orf63A6NC05 138 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 CCL21O00585 134 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 CDX4O14627 284 aaPredicted RBP12.73□□□□□ -0.37
LRP5-206ENST00000529993 Q6ZT83 130 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms