RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 CEACAM18A8MTB9 384 aa7.34□□□□□ -1.24
CTNND1-221ENST00000529873 RBFOX2O43251 390 aaKnown RBP eCLIP7.34□□□□□ -1.244e-7■■■■□ 19.5
CTNND1-221ENST00000529873 HYPMO75409 117 aa7.34□□□□□ -1.24
CTNND1-221ENST00000529873 HINT1P49773 126 aaPredicted RBP7.34□□□□□ -1.24
CTNND1-221ENST00000529873 GFRA1P56159 465 aa7.34□□□□□ -1.24
CTNND1-221ENST00000529873 SLC35B1P78383 322 aa7.34□□□□□ -1.24
CTNND1-221ENST00000529873 OR8G5Q8NG78 346 aa7.34□□□□□ -1.24
CTNND1-221ENST00000529873 AQP3Q92482 292 aa7.34□□□□□ -1.24
CTNND1-221ENST00000529873 SIRT4Q9Y6E7 314 aaPredicted RBP7.34□□□□□ -1.24
CTNND1-221ENST00000529873 A0A1B0GWJ7 208 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SPATA45Q537H7 98 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 MRPL54Q6P161 138 aaKnown RBP7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SRXN1Q9BYN0 137 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SMDT1Q9H4I9 107 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 LPAR2Q9HBW0 351 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 IL36RNQ9UBH0 155 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 EPOPA6NHQ4 379 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 MPTX1A8MV57 137 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 RECKO95980 971 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 CD74P04233 296 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 RNASE1P07998 156 aaKnown RBP7.33□□□□□ -1.24
CTNND1-221ENST00000529873 IER3P46695 156 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SPRED2Q7Z698 418 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 H1FOOQ8IZA3 346 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SLC25A45Q8N413 288 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 PARP14Q460N5 1801 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 IGLV1-36A0A0B4J1U3 117 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF815PA8K554 130 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 C1QCP02747 245 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 RAB9AP51151 201 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SLC25A34Q6PIV7 304 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 CBLN2Q8IUK8 224 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 ITLN1Q8WWA0 313 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 METTL26Q96S19 204 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 NPVFQ9HCQ7 196 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 PLSCR4Q9NRQ2 329 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 PXMP4Q9Y6I8 212 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 TMEM189A5PLL7 270 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 C9orf172C9J069 976 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 NKX2-8O15522 239 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 VSIG10L2P0DP72 767 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 HTN1P15515 57 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 ATP6V0CP27449 155 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 FOXL2P58012 376 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 MEF2CQ06413 473 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-221ENST00000529873 NIT1Q86X76 327 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 LDLRAD3Q86YD5 345 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 ARF6P62330 175 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 PRSS8Q16651 343 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 OR10J6PQ8NGY7 276 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 MRPL30Q8TCC3 161 aaKnown RBP7.33□□□□□ -1.24
CTNND1-221ENST00000529873 SOSTQ9BQB4 213 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 TMEM222Q9H0R3 208 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 WNT5BQ9H1J7 359 aa7.33□□□□□ -1.24
CTNND1-221ENST00000529873 IL4P05112 153 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 RCC1P18754 421 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 RPL27AP46776 148 aaKnown RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 PSG9Q00887 426 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 ROM1Q03395 351 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SNAI3Q3KNW1 292 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 EBLN2Q6P2I7 272 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 ABHD14BQ96IU4 210 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SFXN3Q9BWM7 321 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 ELOVL5Q9NYP7 299 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 TRBV5-7A0A0A0MS05 114 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 A0A1W2PS18 150 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 ZNF735P0CB33 412 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SMIM10L1P0DMW3 83 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 COX5BP10606 129 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 LGALS3P17931 250 aaKnown RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 MFAP4P55083 255 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 CCL8P80075 99 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SMIM10Q96HG1 83 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SEPSECSQ9HD40 501 aaKnown RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 HILPDAQ9Y5L2 63 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 C4orf51C9J302 202 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 NDUFA2O43678 99 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 NAAAQ02083 359 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 KCNAB3O43448 404 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 PGLYRP1O75594 196 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 CDX1P47902 265 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SERF2P84101 59 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 PCOLCEQ15113 449 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 SPANXN1Q5VSR9 72 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 FBLIM1Q8WUP2 373 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 ISOC2Q96AB3 205 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 PRDM14Q9GZV8 571 aa7.32□□□□□ -1.24
CTNND1-221ENST00000529873 PEF1Q9UBV8 284 aaKnown RBP7.32□□□□□ -1.24
CTNND1-221ENST00000529873 IGKV3-7A0A075B6H7 116 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 WNT9BO14905 357 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 MPDU1O75352 247 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 SCTP09683 121 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 CISD1Q9NZ45 108 aaKnown RBP7.31□□□□□ -1.24
CTNND1-221ENST00000529873 KCNK7Q9Y2U2 307 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 UBE2L6O14933 153 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 LRRC75BQ2VPJ9 315 aa7.31□□□□□ -1.24
CTNND1-221ENST00000529873 TMEM30BQ3MIR4 351 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms