RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CYBAP13498 195 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 TGFBR1P36897 503 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 HSPA9P38646 679 aaKnown RBP2.48□□□□□ -2.01
C11orf88-204ENST00000529661 GABRA4P48169 554 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 NUDT2P50583 147 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 CRYBA4P53673 196 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 CTBP2P56545 445 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 PRDX4Q13162 271 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 JOSD1Q15040 202 aaPredicted RBP2.48□□□□□ -2.01
C11orf88-204ENST00000529661 FAM201AQ5SY85 155 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 C1orf194Q5T5A4 169 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 KPRPQ5T749 579 aaPredicted RBP2.48□□□□□ -2.01
C11orf88-204ENST00000529661 TEX36Q5VZQ5 186 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 TBPL2Q6SJ96 375 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 YIPF7Q8N8F6 280 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 LY6G5BQ8NDX9 201 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 OR8S1Q8NH09 359 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 MCFD2Q8NI22 146 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 APOBEC3DQ96AK3 386 aaPredicted RBP2.48□□□□□ -2.01
C11orf88-204ENST00000529661 SFRP2Q96HF1 295 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 OR52B2Q96RD2 323 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 MED18Q9BUE0 208 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 PCBD2Q9H0N5 130 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 IDI2-AS1Q9NZ38 188 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 WASHC3Q9Y3C0 194 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 PCYT1BQ9Y5K3 369 aaPredicted RBP2.48□□□□□ -2.01
C11orf88-204ENST00000529661 PLCH2O75038 1416 aa2.48□□□□□ -2.01
C11orf88-204ENST00000529661 DOCK6Q96HP0 2047 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 OTOFQ9HC10 1997 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 OR4C46A6NHA9 309 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 FAM159BA6NKW6 160 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 RGS5O15539 181 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 FAM228BP0C875 321 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 CTLA4P16410 223 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 ZNF14P17017 642 aaPredicted RBP2.47□□□□□ -2.01
C11orf88-204ENST00000529661 HIST1H1TP22492 207 aaPredicted RBP2.47□□□□□ -2.01
C11orf88-204ENST00000529661 MAP2K4P45985 399 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 TNFRSF9Q07011 255 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 MMDQ15546 238 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 TMEM241Q24JQ0 296 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 IAH1Q2TAA2 248 aaPredicted RBP2.47□□□□□ -2.01
C11orf88-204ENST00000529661 PRR9Q5T870 116 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 LPCAT3Q6P1A2 487 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 SBSNQ6UWP8 590 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 ATP5L2Q7Z4Y8 100 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 DPPA2Q7Z7J5 298 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 REEP6Q96HR9 211 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 C1orf50Q9BV19 199 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 MRPL27Q9P0M9 148 aaKnown RBP2.47□□□□□ -2.01
C11orf88-204ENST00000529661 DCCP43146 1447 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 CEP170Q5SW79 1584 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 SCN4AP35499 1836 aa2.47□□□□□ -2.01
C11orf88-204ENST00000529661 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.46□□□□□ -2.02
C11orf88-204ENST00000529661 WRNQ14191 1432 aaPredicted RBP eCLIP2.46□□□□□ -2.02
C11orf88-204ENST00000529661 OR6C6A6NF89 314 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 FAAHO00519 579 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 DEDDO75618 318 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 CXorf1O96002 111 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 IFNA1P01562 189 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 IGLV3-27P01718 113 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 IGHV1-46P01743 117 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 FBP1P09467 338 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 OR5AC1P0C628 307 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 ESDP10768 282 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 CCL1P22362 96 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 GABARAPL2P60520 117 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 HES3Q5TGS1 186 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 SMARCD3Q6STE5 483 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 TCF23Q7RTU1 214 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 PEBP4Q96S96 227 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 MED28Q9H204 178 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 C11orf49Q9H6J7 331 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 TMEM38BQ9NVV0 291 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 TAS2R7Q9NYW3 318 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 TAS2R1Q9NYW7 299 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 ZNF492Q9P255 531 aa2.46□□□□□ -2.02
C11orf88-204ENST00000529661 FAM32AQ9Y421 112 aaKnown RBP2.46□□□□□ -2.02
C11orf88-204ENST00000529661 KIF1BO60333 1816 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 IGHV3OR15-7A0A075B7D8 119 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 IZUMO1RA6ND01 250 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 B4DEV8 164 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 FSTL3O95633 263 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 MT-CO2P00403 227 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 IGHMP01871 453 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 IGLV7-43P04211 117 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 IFI30P13284 250 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 ORM2P19652 201 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 OR10J1P30954 320 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 RAB4BP61018 213 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 HERVK_113P63121 156 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 BTN3A2P78410 334 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 S100A12P80511 92 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 RUNX1Q01196 453 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 PLPPR5Q32ZL2 321 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 TMEM69Q5SWH9 247 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 EBLN2Q6P2I7 272 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 C5orf46Q6UWT4 87 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 TMEM144Q7Z5S9 345 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 OOSP2Q86WS3 158 aa2.45□□□□□ -2.02
C11orf88-204ENST00000529661 PHF13Q86YI8 300 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms