RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 RPLP1P05386 114 aaKnown RBP6.97□□□□□ -1.29
CTNND1-220ENST00000529526 ARL14EPLP0DKL9 152 aa6.97□□□□□ -1.29
CTNND1-220ENST00000529526 TMEM78Q5T7P6 136 aa6.97□□□□□ -1.29
CTNND1-220ENST00000529526 OR10J6PQ8NGY7 276 aa6.97□□□□□ -1.29
CTNND1-220ENST00000529526 TAF15Q92804 592 aaKnown RBP eCLIP6.97□□□□□ -1.293e-8■■■□□ 14.9
CTNND1-220ENST00000529526 PRDM14Q9GZV8 571 aa6.97□□□□□ -1.29
CTNND1-220ENST00000529526 CD74P04233 296 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 GCSHP23434 173 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 H2BFSP57053 126 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 ARF6P62330 175 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 C19orf48Q6RUI8 117 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 C1orf174Q8IYL3 243 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 ZNF502Q8TBZ5 544 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 TMEM54Q969K7 222 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 F5P12259 2224 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 TUBGCP6Q96RT7 1819 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 PPIAL4CA0A0B4J2A2 164 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 CFDP00746 253 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-220ENST00000529526 NMBP08949 121 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 CELA3AP09093 270 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 RFPL3SP0C7P2 107 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 PPIAL4GP0DN37 164 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 RELBQ01201 579 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 ARL6IP6Q8N6S5 226 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 OR1N2Q8NGR9 330 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 CTHRC1Q96CG8 243 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 Q96M66 194 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 HSPB7Q9UBY9 170 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 TUBD1Q9UJT1 453 aa6.96□□□□□ -1.29
CTNND1-220ENST00000529526 SBF2Q86WG5 1849 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 H0YL77 283 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 CDK2AP1O14519 115 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 RAMP1O60894 148 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 SMIM6P0DI80 62 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 MC5RP33032 325 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 UQCRFS1P47985 274 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 UCNP55089 124 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 Q5BKY6 102 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 PEAR1Q5VY43 1037 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-220ENST00000529526 EBLN2Q6P2I7 272 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 ABHD12Q8N2K0 398 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 RHOVQ96L33 236 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 NUDT16L1Q9BRJ7 211 aaKnown RBP6.96□□□□□ -1.3
CTNND1-220ENST00000529526 SCNM1Q9BWG6 230 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 WNT9BO14905 357 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 KLF7O75840 302 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-220ENST00000529526 IGHMP01871 453 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 THY1P04216 161 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 SFTPCP11686 197 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 RAB24Q969Q5 203 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 HSPB9Q9BQS6 159 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 QTRT1Q9BXR0 403 aaKnown RBP6.96□□□□□ -1.3
CTNND1-220ENST00000529526 HSPB1P04792 205 aaKnown RBP6.96□□□□□ -1.3
CTNND1-220ENST00000529526 MAS1LP35410 378 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 PKIAP61925 76 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF658BQ4V348 819 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-220ENST00000529526 LINC01590Q5TEZ4 76 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 CALHM1Q8IU99 346 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 PKIBQ9C010 78 aa6.96□□□□□ -1.3
CTNND1-220ENST00000529526 IGKV3D-11A0A0A0MRZ8 115 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 H7C2G1 150 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 HAX1O00165 279 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 IGKV3-11P04433 115 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 TNFRSF9Q07011 255 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 CD200R1LQ6Q8B3 271 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 LINC01560Q8TB33 94 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 LOXL4Q96JB6 756 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 SIGLEC12Q96PQ1 595 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF430Q9H8G1 570 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 TNS1Q9HBL0 1735 aaKnown RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 NRXN2Q9P2S2 1712 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 PRR19A6NJB7 356 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 SS18L1O75177 396 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 LAIR2Q6ISS4 152 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 PUSL1Q8N0Z8 303 aaKnown RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 SHISA5Q8N114 240 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 DNASE2BQ8WZ79 361 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 NINQ8N4C6 2090 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 A6NDN8 102 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 KLF4O43474 513 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 KBTBD11O94819 623 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 HOXD4P09016 255 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 CD99P14209 185 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 OTX1P32242 354 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-220ENST00000529526 FHITP49789 147 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 FAM209AQ5JX71 171 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 ASPHD2Q6ICH7 369 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 OR11H4Q8NGC9 324 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 NEU1Q99519 415 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 SLC25A33Q9BSK2 321 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 ZFP30Q9Y2G7 519 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 SPAG17Q6Q759 2223 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 hCG_38984A0A1B0GV85 526 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 TMEM187Q14656 261 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 SPSB2Q99619 263 aa6.95□□□□□ -1.3
CTNND1-220ENST00000529526 PIMREGQ9BSJ6 248 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms