RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ZCCHC14Q8WYQ9 949 aaKnown RBP15.28■□□□□ 0.04
LTBP3-210ENST00000528516 TMEM222Q9H0R3 208 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 GYPAP02724 150 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 PFN1P07737 140 aaKnown RBP15.28■□□□□ 0.04
LTBP3-210ENST00000528516 PAX1P15863 534 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 RPL23P62829 140 aaKnown RBP15.28■□□□□ 0.04
LTBP3-210ENST00000528516 SLC38A11Q08AI6 406 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 ZP4Q12836 540 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 SSMEM1Q8WWF3 244 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 MIEN1Q9BRT3 115 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 ARFGEF3Q5TH69 2177 aa15.28■□□□□ 0.04
LTBP3-210ENST00000528516 ZNF766Q5HY98 468 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 ACSM6Q6P461 480 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 PARLQ9H300 379 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 VDAC1P21796 283 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 BRS3P32247 399 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 MRPS11P82912 194 aaKnown RBP15.27■□□□□ 0.04
LTBP3-210ENST00000528516 FFAR4Q5NUL3 377 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 DEFB124Q8NES8 71 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 TECTBQ96PL2 329 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 MANBALQ9NQG1 85 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 B3GAT1Q9P2W7 334 aa15.27■□□□□ 0.04
LTBP3-210ENST00000528516 MUC6Q6W4X9 2439 aa15.27■□□□□ 0.03
LTBP3-210ENST00000528516 MT-CO3P00414 261 aa15.27■□□□□ 0.03
LTBP3-210ENST00000528516 TGIF2LYQ8IUE0 185 aa15.27■□□□□ 0.03
LTBP3-210ENST00000528516 LIN7CQ9NUP9 197 aaKnown RBP15.27■□□□□ 0.03
LTBP3-210ENST00000528516 OR6C3Q9NZP0 311 aa15.27■□□□□ 0.03
LTBP3-210ENST00000528516 CLN8Q9UBY8 286 aa15.27■□□□□ 0.03
LTBP3-210ENST00000528516 THADAQ6YHU6 1953 aa15.27■□□□□ 0.03
LTBP3-210ENST00000528516 A8MXE2 369 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 MT-CO2P00403 227 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 RANP62826 216 aaKnown RBP15.26■□□□□ 0.03
LTBP3-210ENST00000528516 SAPCD1Q5SSQ6 148 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 ABHD14BQ96IU4 210 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 Q96M66 194 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 TAAR3PQ9P1P4 343 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 TMEM50AO95807 157 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 GAGE1Q13065 139 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 SLC23A3Q6PIS1 610 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 CYP2G1PQ6ZSU1 146 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 LYG1Q8N1E2 194 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 MOB3AQ96BX8 217 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 RNF24Q9Y225 148 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 WNK1Q9H4A3 2382 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 SYNGR2O43760 224 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 NPIPB7O75200 414 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 IGHMP01871 453 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF17P17021 662 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 CISD2Q8N5K1 135 aaKnown RBP15.26■□□□□ 0.03
LTBP3-210ENST00000528516 CEP295Q9C0D2 2601 aa15.26■□□□□ 0.03
LTBP3-210ENST00000528516 SPAARA0A1B0GVQ0 90 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 DUXBA0A1W2PPF3 345 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 KBTBD11O94819 623 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 OR5G3P0C626 314 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 SSPNQ14714 243 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF718Q3SXZ3 478 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 LEMD1Q68G75 181 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 SAP25Q8TEE9 199 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 ZGRF1Q86YA3 2104 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 IGHV3OR15-7A0A075B7D8 119 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 EGR1P18146 543 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 S100A7P31151 101 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 HNRNPA3P51991 378 aaKnown RBP15.25■□□□□ 0.03
LTBP3-210ENST00000528516 RBM11P57052 281 aaKnown RBP15.25■□□□□ 0.03
LTBP3-210ENST00000528516 TDRG1Q3Y452 100 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 Q6ZN92 141 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 SELENOHQ8IZQ5 122 aaKnown RBP15.25■□□□□ 0.03
LTBP3-210ENST00000528516 LRTM2Q8N967 370 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 P2RX4Q99571 388 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 PRR19A6NJB7 356 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 TFF1P04155 84 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 GNB1P62873 340 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 MMDQ15546 238 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 MDP1Q86V88 176 aa15.25■□□□□ 0.03
LTBP3-210ENST00000528516 MRPS18CQ9Y3D5 142 aaKnown RBP15.25■□□□□ 0.03
LTBP3-210ENST00000528516 DTYMKP23919 212 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 SUMO1P63165 101 aaKnown RBP15.24■□□□□ 0.03
LTBP3-210ENST00000528516 OR10G4Q8NGN3 311 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 UHRF2Q96PU4 802 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 C17orf112F2Z3M2 114 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 CRYABP02511 175 aaKnown RBP15.24■□□□□ 0.03
LTBP3-210ENST00000528516 TNFSF4P23510 183 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 FOXG1P55316 489 aaPredicted RBP15.24■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF90Q03938 601 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 PCOLCEQ15113 449 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 ANKRD39Q53RE8 183 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 MYO18BQ8IUG5 2567 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 LNP1A1A4G5 178 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 TCF23Q7RTU1 214 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 SLC25A40Q8TBP6 338 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 PCED1AQ9H1Q7 454 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 ZNF552Q9H707 407 aaPredicted RBP15.24■□□□□ 0.03
LTBP3-210ENST00000528516 NCOA6Q14686 2063 aaPredicted RBP15.24■□□□□ 0.03
LTBP3-210ENST00000528516 ARHGAP21Q5T5U3 1957 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 IGHV1-45A0A0A0MS14 117 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 CPEB3Q8NE35 698 aaKnown RBP15.24■□□□□ 0.03
LTBP3-210ENST00000528516 OR4C5Q8NGB2 326 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 LRRC29Q8WV35 223 aa15.24■□□□□ 0.03
LTBP3-210ENST00000528516 ANAPC16Q96DE5 110 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms