RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 OSR2Q8N2R0 312 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 ZNF561Q8N587 486 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 ZSCAN4Q8NAM6 433 aaPredicted RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 OR8G5Q8NG78 346 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 OR2Z1Q8NG97 314 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 OR4S1Q8NGB4 309 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 OR4D10Q8NGI6 311 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 OR13G1Q8NGZ3 307 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 OR56B4Q8NH76 319 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 SPATA3Q8NHX4 192 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 CA5BP1Q8WTZ4 195 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 ITLN1Q8WWA0 313 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 EMG1Q92979 244 aaKnown RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 RNASE6Q93091 150 aaKnown RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 ZNF503Q96F45 646 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 AKR1E2Q96JD6 320 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 PRRT1Q99946 306 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 SULT4A1Q9BR01 284 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 TCEAL7Q9BRU2 100 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 ZNF2Q9BSG1 426 aaPredicted RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 HDHD3Q9BSH5 251 aaPredicted RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 FAAP24Q9BTP7 215 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 ST6GALNAC5Q9BVH7 336 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 BEX2Q9BXY8 128 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 CXXC4Q9H2H0 198 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 OR51I2Q9H344 312 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 UBTD1Q9HAC8 227 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 BEX1Q9HBH7 125 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 LPAR2Q9HBW0 351 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 HRASLSQ9HDD0 168 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 KCNJ16Q9NPI9 418 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 IFT46Q9NQC8 304 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 TMEM100Q9NV29 134 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 PLEKHJ1Q9NW61 149 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 MCUBQ9NWR8 336 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 IL36GQ9NZH8 169 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 TAAR3PQ9P1P4 343 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 GHRLQ9UBU3 117 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 MLXQ9UH92 298 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 ZNF230Q9UIE0 474 aaPredicted RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 ST3GAL6Q9Y274 331 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 NOP16Q9Y3C1 178 aaKnown RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 TBL2Q9Y4P3 447 aaKnown RBP3.47□□□□□ -1.85
CD44-226ENST00000527889 KPTNQ9Y664 436 aa3.47□□□□□ -1.85
CD44-226ENST00000527889 IGKV1D-8A0A087WSZ0 117 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 TRAV26-1A0A087WT03 109 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 RFPL4AA6NLU0 287 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 CENPXA8MT69 81 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 LINC00587B1AMM8 73 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 SHISA9B4DS77 424 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 E7EQL1 145 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 RFPL4AL1F8VTS6 287 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 CDIPTO14735 213 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 WNT9BO14905 357 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 SPRY3O43610 288 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 ZNF780AO75290 641 aaPredicted RBP3.46□□□□□ -1.86
CD44-226ENST00000527889 PDCD6O75340 191 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 OR7C1O76099 320 aaPredicted RBP3.46□□□□□ -1.86
CD44-226ENST00000527889 IFNA2P01563 188 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 IGHV3-13P01766 116 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 PMP2P02689 132 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 TFF1P04155 84 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 CD3DP04234 171 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 TCRBP04435 133 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 MELTFP08582 738 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 DANCRP0C864 163 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 AKAIN1P0CW23 69 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 RNF224P0DH78 156 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 SMIM6P0DI80 62 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 PGA5P0DJD9 388 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 MPZP25189 248 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 SLC6A1P30531 599 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 NPBWR1P48145 328 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 TAS2R19P59542 299 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 SEC61GP60059 68 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 FGF12P61328 243 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 RPS23P62266 143 aaKnown RBP3.46□□□□□ -1.86
CD44-226ENST00000527889 TFF3Q07654 80 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 PAN3Q58A45 887 aaKnown RBP3.46□□□□□ -1.86
CD44-226ENST00000527889 NCMAPQ5T1S8 102 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 ATAD3CQ5T2N8 411 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 STEAP1BQ6NZ63 245 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 KCNIP4Q6PIL6 250 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 PLET1Q6UQ28 207 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 ZNF782Q6ZMW2 699 aaPredicted RBP3.46□□□□□ -1.86
CD44-226ENST00000527889 C17orf107Q6ZR85 190 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 C5orf24Q7Z6I8 188 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 TGIF2LXQ8IUE1 241 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 C11orf53Q8IXP5 236 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 BOD1L2Q8IYS8 172 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 SAXO1Q8IYX7 474 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 ZCCHC24Q8N2G6 241 aaKnown RBP3.46□□□□□ -1.86
CD44-226ENST00000527889 BOLLQ8N9W6 283 aaKnown RBP3.46□□□□□ -1.86
CD44-226ENST00000527889 TEX45Q8NA69 505 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 TMEM229BQ8NBD8 167 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 NUP37Q8NFH4 326 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 OR10A7Q8NGE5 316 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 OR5T2Q8NGG2 359 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 OR51S1Q8NGJ8 323 aa3.46□□□□□ -1.86
CD44-226ENST00000527889 OR5D13Q8NGL4 314 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms