RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 F2RP25116 425 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 PSMB3P49720 205 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 HERV-K104P61576 105 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 IGLV3-21P80748 117 aaPredicted RBP6.38□□□□□ -1.39
SOX6-208ENST00000527619 SERF2P84101 59 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 CD300EQ496F6 205 aaPredicted RBP6.38□□□□□ -1.39
SOX6-208ENST00000527619 TDHQ8IZJ6 230 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 PLPPR1Q8TBJ4 325 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 BLNKQ8WV28 456 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 Q96M66 194 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 HSPB8Q9UJY1 196 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 DOCK8Q8NF50 2099 aa6.38□□□□□ -1.39
SOX6-208ENST00000527619 IGLC7A0M8Q6 106 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 GRIFINA4D1Z8 144 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 FAM166BA8MTA8 275 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 KLK10O43240 276 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 TRAF3IP2O43734 574 aaPredicted RBP6.37□□□□□ -1.39
SOX6-208ENST00000527619 DUX1O43812 170 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 HYPMO75409 117 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 CEACAM4O75871 244 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 WISP1O95388 367 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 CLPSP04118 112 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 C1QTNF9P0C862 333 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 IGLC1P0CG04 106 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 FCGR2AP12318 317 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 PVRP15151 417 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 FBLP22087 321 aaKnown RBP6.37□□□□□ -1.39
SOX6-208ENST00000527619 AMTP48728 403 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 PAX9P55771 341 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 GNG3P63215 75 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 SRSF1Q07955 248 aaKnown RBP eCLIP6.37□□□□□ -1.39
SOX6-208ENST00000527619 DMRTC1Q5HYR2 192 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 C1orf174Q8IYL3 243 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 BAHD1Q8TBE0 780 aaPredicted RBP6.37□□□□□ -1.39
SOX6-208ENST00000527619 LHX4Q969G2 390 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 DUX5Q96PT3 197 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 PRTFDC1Q9NRG1 225 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 PLA2G3Q9NZ20 509 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 TP53TG3Q9ULZ0 132 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 VDAC3Q9Y277 283 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 LTBP2Q14767 1821 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 B5MCH6 92 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 GDF9O60383 454 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 SERF1AO75920 110 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 NXPH3O95157 252 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 TIAF1O95411 115 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 IGLC2P0DOY2 106 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 IGLC3P0DOY3 106 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 DRD3P35462 400 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 LINC00310P59036 64 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 YPEL3P61236 119 aaPredicted RBP6.37□□□□□ -1.39
SOX6-208ENST00000527619 MRPL23Q16540 153 aaKnown RBP6.37□□□□□ -1.39
SOX6-208ENST00000527619 NEGR1Q7Z3B1 354 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 PNKDQ8N490 385 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 PIGTQ969N2 578 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 RNF183Q96D59 192 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 APOOQ9BUR5 198 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 STRADBQ9C0K7 418 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 PRO3102Q9H379 93 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 SLC39A9Q9NUM3 307 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 POLR1DQ9Y2S0 133 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 KIAA2026Q5HYC2 2103 aa6.37□□□□□ -1.39
SOX6-208ENST00000527619 A0A1W2PR80 420 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 OR2T8A6NH00 312 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 DIRC3C9JPN6 131 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 MS4A18H0YCH9 400 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 CLDN1O95832 211 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 CD99P14209 185 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 AREGP15514 252 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 CD27P26842 260 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 OR1D4P47884 311 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 FOXL1Q12952 345 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 MS4A18Q3C1V0 323 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 NMSQ5H8A3 153 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 WIPI1Q5MNZ9 446 aaPredicted RBP6.36□□□□□ -1.39
SOX6-208ENST00000527619 SPATA31B1PQ5VZV4 182 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.36□□□□□ -1.39
SOX6-208ENST00000527619 TBC1D26Q86UD7 250 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 OR4F5Q8NH21 305 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 PSMF1Q92530 271 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 OR4F4Q96R69 305 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 SAMD10Q9BYL1 202 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 ZNF703Q9H7S9 590 aaPredicted RBP6.36□□□□□ -1.39
SOX6-208ENST00000527619 ZDHHC11Q9H8X9 412 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 TRAPPC2LQ9UL33 140 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 CSDC2Q9Y534 153 aaKnown RBP6.36□□□□□ -1.39
SOX6-208ENST00000527619 LHFPL6Q9Y693 200 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 LAMA3Q16787 3333 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 NPIPB13A6NJU9 1138 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 C17orf51A8MQB3 221 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 NPIPB4C9JG80 1138 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 J3QR06 171 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 MLNRO43193 412 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 ZNF207O43670 478 aaKnown RBP6.36□□□□□ -1.39
SOX6-208ENST00000527619 VDAC1P21796 283 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 TSPOP30536 169 aa6.36□□□□□ -1.39
SOX6-208ENST00000527619 LHX2P50458 406 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms