RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 DUSP21Q9H596 190 aa12.26□□□□□ -0.45
PTPRU-210ENST00000527027 RGS10O43665 173 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 SLC25A17O43808 307 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 CNIH1O95406 144 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 BRI3O95415 125 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 CSN3P07498 182 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 AADACP22760 399 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 LINC00205P59089 165 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 ST3GAL4Q11206 333 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 KCTD21Q4G0X4 260 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 AHSA2Q719I0 299 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 Q8N402 240 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 ZNF383Q8NA42 475 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 KCNG3Q8TAE7 436 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 TMEM68Q96MH6 324 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 NICN1Q9BSH3 213 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 TM2D1Q9BX74 207 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 TMEM59Q9BXS4 323 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 PLEKHJ1Q9NW61 149 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 FKBP14Q9NWM8 211 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 OR1A1Q9P1Q5 309 aa12.25□□□□□ -0.45
PTPRU-210ENST00000527027 PEF1Q9UBV8 284 aaKnown RBP12.25□□□□□ -0.45
PTPRU-210ENST00000527027 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 PTGES3LE9PB15 166 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 CDK1P06493 297 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 SSBP2P81877 361 aaPredicted RBP12.24□□□□□ -0.45
PTPRU-210ENST00000527027 C1orf100Q5SVJ3 147 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 LAIR2Q6ISS4 152 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 ZNF343Q6P1L6 599 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 LINC00322Q6ZN03 302 aaPredicted RBP12.24□□□□□ -0.45
PTPRU-210ENST00000527027 PRSS48Q7RTY5 328 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 PDPNQ86YL7 162 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 PTX4Q96A99 478 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 TINAGL1Q9GZM7 467 aaPredicted RBP12.24□□□□□ -0.45
PTPRU-210ENST00000527027 HIPK2Q9H2X6 1198 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 ZNF221Q9UK13 617 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 ADAM30Q9UKF2 790 aa12.24□□□□□ -0.45
PTPRU-210ENST00000527027 SHISA3A0PJX4 238 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 IZUMO1RA6ND01 250 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 MYL12BO14950 172 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 APOA2P02652 100 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
PTPRU-210ENST00000527027 PJVKQ0ZLH3 352 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 GLT8D1Q68CQ7 371 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 USMG5Q96IX5 58 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 RETNQ9HD89 108 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 CEPT1Q9Y6K0 416 aa12.23□□□□□ -0.45
PTPRU-210ENST00000527027 SCTP09683 121 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 LGALS7P47929 136 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 HLA-DRB3P79483 266 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 UNC119Q13432 240 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 LRRTM1Q86UE6 522 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 BVESQ8NE79 360 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 OR2K2Q8NGT1 345 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 MND1Q9BWT6 205 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 CCDC90BQ9GZT6 254 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 VCX3AQ9NNX9 186 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 SLC35D1Q9NTN3 355 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 AK3Q9UIJ7 227 aa12.22□□□□□ -0.45
PTPRU-210ENST00000527027 A0A0A6YYD4 124 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 TMEM14DPA8MWL7 114 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 OR2A4O95047 310 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 IGLV2-23P01705 113 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 TRBV12-3P01733 135 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 CRYGBP07316 175 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 WNT4P56705 351 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 QRFPP83859 136 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 DEFA5Q01523 94 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 DYRK1AQ13627 763 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 INSL4Q14641 139 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 RPEL1Q2QD12 228 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 ACSM3Q53FZ2 586 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 PHYHIPQ92561 330 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 SNAPC3Q92966 411 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 FAM110AQ9BQ89 295 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 HDHD3Q9BSH5 251 aaPredicted RBP12.21□□□□□ -0.45
PTPRU-210ENST00000527027 KCNK15Q9H427 330 aa12.21□□□□□ -0.45
PTPRU-210ENST00000527027 A0A087WXM4 84 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 M0R1X1 148 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 SOCS1O15524 211 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 AIREO43918 545 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 CD37P11049 281 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.2□□□□□ -0.46
PTPRU-210ENST00000527027 FCGR1BQ92637 280 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 LPAR5Q9H1C0 372 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 PLEKHA3Q9HB20 300 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 Q9N2K0 584 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 COA4Q9NYJ1 87 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 PEMTQ9UBM1 199 aa12.2□□□□□ -0.46
PTPRU-210ENST00000527027 A0A0B4J203 849 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 IGKV1-6A0A0C4DH72 117 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 TPPPO94811 219 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 BPNT1O95861 308 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 SRMP19623 302 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 CD81P60033 236 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 TBCEQ15813 527 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-210ENST00000527027 ZNF773Q6PK81 442 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 FAM89BQ8N5H3 189 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 MS4A15Q8N5U1 240 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms