RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 NDUFA11Q86Y39 141 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 PDPNQ86YL7 162 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 STPG2Q8N412 459 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 OR5AP2Q8NGF4 316 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 OR4X2Q8NGF9 303 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 FLYWCH2Q96CP2 140 aaKnown RBP12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 ZNF107Q9UII5 783 aaPredicted RBP12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 RRHO14718 337 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 SLC22A5O76082 557 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 HLA-DRB1P01911 266 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 IGKV1-16P04430 117 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 NAT1P18440 290 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 DUTP33316 252 aaKnown RBP12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 TAGLNQ01995 201 aaKnown RBP12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 SNX29P2Q8IUI4 249 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 ZNF645Q8N7E2 425 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 BVESQ8NE79 360 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 GPX8Q8TED1 209 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 ADTRPQ96IZ2 230 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 TSNAXQ99598 290 aaKnown RBP12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 MMP27Q9H306 513 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 FBXL15Q9H469 300 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 ANAPC10Q9UM13 185 aa12.78□□□□□ -0.36
SSSCA1-202ENST00000526433 FCN1O00602 326 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 NOL3O60936 208 aaKnown RBP12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 AADACP22760 399 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 SLC35B1P78383 322 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 CDK10Q15131 360 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 PSG5Q15238 335 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 DYNC2LI1Q8TCX1 351 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 GIMAP1Q8WWP7 306 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 GON7Q9BXV9 100 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 RBMX2Q9Y388 322 aaKnown RBP12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 CEPT1Q9Y6K0 416 aa12.77□□□□□ -0.37
SSSCA1-202ENST00000526433 IGHV7-81A0A0B4J1V7 117 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 LINC00473A8K010 186 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 CTDSP2O14595 271 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 IGLV2-14P01704 120 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 OPN1MWP04001 364 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 OPN1MW2P0DN77 364 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 OPN1MW3P0DN78 364 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 RRASP10301 218 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 RFX2P48378 723 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 PLGLAQ15195 96 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 LYSMD2Q8IV50 215 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 DDB2Q92466 427 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 ISOC1Q96CN7 298 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 MIXL1Q9H2W2 232 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 OR51J1Q9H342 316 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 SCPEP1Q9HB40 452 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 EXTL2Q9UBQ6 330 aa12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 TSSC4Q9Y5U2 329 aaPredicted RBP12.76□□□□□ -0.37
SSSCA1-202ENST00000526433 H3BMQ9 156 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 SULT1C2O00338 296 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 PPYP01298 95 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 PMP2P02689 132 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 IGF1P05019 195 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 LGALS7P47929 136 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 CBX3Q13185 183 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 RTL8BQ17RB0 113 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 DHRS11Q6UWP2 260 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 OVCH2Q7RTZ1 564 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 COMMD1Q8N668 190 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 SECTM1Q8WVN6 248 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 R3HDM4Q96D70 268 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 CLCC1Q96S66 551 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 CCL28Q9NRJ3 127 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 EHFQ9NZC4 300 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 ADAM30Q9UKF2 790 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 WSB1Q9Y6I7 421 aa12.75□□□□□ -0.37
SSSCA1-202ENST00000526433 SHOXO15266 292 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 RGS5O15539 181 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 SLC25A17O43808 307 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 SPDEFO95238 335 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 IGLV2-23P01705 113 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 VDAC1P21796 283 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 HLA-DMAP28067 261 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 TAS2R46P59540 309 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 RPL30P62888 115 aaKnown RBP12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 CX3CL1P78423 397 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 DYRK1AQ13627 763 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 KHDC1LQ5JSQ8 128 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 TEX38Q6PEX7 206 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 OR5H2Q8NGV7 314 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 SLC5A7Q9GZV3 580 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 PARP11Q9NR21 331 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 CCDC59Q9P031 241 aaKnown RBP12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 ZNF580Q9UK33 172 aa12.74□□□□□ -0.37
SSSCA1-202ENST00000526433 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 G3V318 75 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 ATP6V0E1O15342 81 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 TPPPO94811 219 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 CRYZL1O95825 349 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms