RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SLC2A5P22732 501 aa2.58□□□□□ -2
CD44-219ENST00000525685 STOMP27105 288 aa2.58□□□□□ -2
CD44-219ENST00000525685 G0S2P27469 103 aa2.58□□□□□ -2
CD44-219ENST00000525685 CD40LGP29965 261 aa2.58□□□□□ -2
CD44-219ENST00000525685 APLNRP35414 380 aa2.58□□□□□ -2
CD44-219ENST00000525685 GLRXP35754 106 aa2.58□□□□□ -2
CD44-219ENST00000525685 GGT2P36268 569 aa2.58□□□□□ -2
CD44-219ENST00000525685 POLR2IP36954 125 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 NAA10P41227 235 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 GUCA1AP43080 201 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 GLP1RP43220 463 aa2.58□□□□□ -2
CD44-219ENST00000525685 FABP6P51161 128 aa2.58□□□□□ -2
CD44-219ENST00000525685 AP2S1P53680 142 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 PCBD1P61457 104 aa2.58□□□□□ -2
CD44-219ENST00000525685 RPS23P62266 143 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 LSM6P62312 80 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 SNRPD2P62316 118 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 ESRRGP62508 458 aa2.58□□□□□ -2
CD44-219ENST00000525685 UNC119Q13432 240 aa2.58□□□□□ -2
CD44-219ENST00000525685 PTGES3Q15185 160 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 KLHL12Q53G59 568 aa2.58□□□□□ -2
CD44-219ENST00000525685 TMEM255AQ5JRV8 349 aa2.58□□□□□ -2
CD44-219ENST00000525685 C12orf73Q69YU5 71 aa2.58□□□□□ -2
CD44-219ENST00000525685 Q6ZVH6 145 aa2.58□□□□□ -2
CD44-219ENST00000525685 LRP11Q86VZ4 500 aa2.58□□□□□ -2
CD44-219ENST00000525685 ZNF101Q8IZC7 436 aa2.58□□□□□ -2
CD44-219ENST00000525685 LRRC75A-AS1Q8N1F1 130 aa2.58□□□□□ -2
CD44-219ENST00000525685 MUC15Q8N387 334 aa2.58□□□□□ -2
CD44-219ENST00000525685 CBR4Q8N4T8 237 aa2.58□□□□□ -2
CD44-219ENST00000525685 FAM71E2Q8N5Q1 922 aa2.58□□□□□ -2
CD44-219ENST00000525685 Q8N9W7 124 aa2.58□□□□□ -2
CD44-219ENST00000525685 SUMF2Q8NBJ7 301 aa2.58□□□□□ -2
CD44-219ENST00000525685 C19orf18Q8NEA5 215 aa2.58□□□□□ -2
CD44-219ENST00000525685 CCDC54Q8NEL0 328 aa2.58□□□□□ -2
CD44-219ENST00000525685 OR4F15Q8NGB8 312 aa2.58□□□□□ -2
CD44-219ENST00000525685 OR6K6Q8NGW6 343 aa2.58□□□□□ -2
CD44-219ENST00000525685 NDNFQ8TB73 568 aa2.58□□□□□ -2
CD44-219ENST00000525685 SLC7A6Q92536 515 aa2.58□□□□□ -2
CD44-219ENST00000525685 STMN2Q93045 179 aa2.58□□□□□ -2
CD44-219ENST00000525685 RPUSD4Q96CM3 377 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 ZMYND19Q96E35 227 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 PLEKHA8Q96JA3 519 aa2.58□□□□□ -2
CD44-219ENST00000525685 CLCC1Q96S66 551 aa2.58□□□□□ -2
CD44-219ENST00000525685 TBX15Q96SF7 602 aa2.58□□□□□ -2
CD44-219ENST00000525685 PITX2Q99697 317 aa2.58□□□□□ -2
CD44-219ENST00000525685 SEC22CQ9BRL7 303 aa2.58□□□□□ -2
CD44-219ENST00000525685 PARD6GQ9BYG4 376 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 PRRG3Q9BZD7 231 aa2.58□□□□□ -2
CD44-219ENST00000525685 MFFQ9GZY8 342 aa2.58□□□□□ -2
CD44-219ENST00000525685 ALX4Q9H161 411 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 C1orf198Q9H425 327 aa2.58□□□□□ -2
CD44-219ENST00000525685 SAV1Q9H4B6 383 aaPredicted RBP2.58□□□□□ -2
CD44-219ENST00000525685 CBLN4Q9NTU7 201 aa2.58□□□□□ -2
CD44-219ENST00000525685 TVP23BQ9NYZ1 205 aa2.58□□□□□ -2
CD44-219ENST00000525685 KCNIP1Q9NZI2 227 aa2.58□□□□□ -2
CD44-219ENST00000525685 MYEF2Q9P2K5 600 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 KIF25Q9UIL4 384 aa2.58□□□□□ -2
CD44-219ENST00000525685 ENPP5Q9UJA9 477 aa2.58□□□□□ -2
CD44-219ENST00000525685 RPL36Q9Y3U8 105 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 TIMM10BQ9Y5J6 103 aa2.58□□□□□ -2
CD44-219ENST00000525685 HELZ2Q9BYK8 2649 aaKnown RBP2.58□□□□□ -2
CD44-219ENST00000525685 PCNX1Q96RV3 2341 aa2.58□□□□□ -2
CD44-219ENST00000525685 AKAP9Q99996 3911 aa2.57□□□□□ -2
CD44-219ENST00000525685 ASH1LQ9NR48 2969 aaKnown RBP2.57□□□□□ -2
CD44-219ENST00000525685 IGLV3-9A0A075B6K5 115 aa2.57□□□□□ -2
CD44-219ENST00000525685 A0A0A6YYH2 397 aa2.57□□□□□ -2
CD44-219ENST00000525685 C5orf49A4QMS7 147 aa2.57□□□□□ -2
CD44-219ENST00000525685 A6NJ64 397 aa2.57□□□□□ -2
CD44-219ENST00000525685 F5H5K5 113 aa2.57□□□□□ -2
CD44-219ENST00000525685 H7C417 338 aa2.57□□□□□ -2
CD44-219ENST00000525685 ZNF593O00488 134 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 PTHP01270 115 aa2.57□□□□□ -2
CD44-219ENST00000525685 IFNA6P05013 189 aa2.57□□□□□ -2
CD44-219ENST00000525685 MRPL3P09001 348 aaKnown RBP2.57□□□□□ -2
CD44-219ENST00000525685 CTXN2P0C2S0 81 aa2.57□□□□□ -2
CD44-219ENST00000525685 OR4A8P0C604 315 aa2.57□□□□□ -2
CD44-219ENST00000525685 ZNF823P16415 610 aa2.57□□□□□ -2
CD44-219ENST00000525685 MDKP21741 143 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 PSMB6P28072 239 aa2.57□□□□□ -2
CD44-219ENST00000525685 FMO3P31513 532 aa2.57□□□□□ -2
CD44-219ENST00000525685 TALDO1P37837 337 aa2.57□□□□□ -2
CD44-219ENST00000525685 MPV17P39210 176 aa2.57□□□□□ -2
CD44-219ENST00000525685 VDAC2P45880 294 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 CDC34P49427 236 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 PPOXP50336 477 aa2.57□□□□□ -2
CD44-219ENST00000525685 NKX2-5P52952 324 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 ATP5J2P56134 94 aa2.57□□□□□ -2
CD44-219ENST00000525685 TAS2R60P59551 318 aa2.57□□□□□ -2
CD44-219ENST00000525685 ACTBP60709 375 aa2.57□□□□□ -2
CD44-219ENST00000525685 ACTA2P62736 377 aa2.57□□□□□ -2
CD44-219ENST00000525685 ACTG1P63261 375 aa2.57□□□□□ -2
CD44-219ENST00000525685 ACTG2P63267 376 aa2.57□□□□□ -2
CD44-219ENST00000525685 ACTC1P68032 377 aa2.57□□□□□ -2
CD44-219ENST00000525685 ACTA1P68133 377 aa2.57□□□□□ -2
CD44-219ENST00000525685 ELF3P78545 371 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 FGL1Q08830 312 aa2.57□□□□□ -2
CD44-219ENST00000525685 APOFQ13790 326 aa2.57□□□□□ -2
CD44-219ENST00000525685 GGTLC2Q14390 218 aa2.57□□□□□ -2
CD44-219ENST00000525685 SMCO1Q147U7 214 aa2.57□□□□□ -2
CD44-219ENST00000525685 MAD2L1BPQ15013 274 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms