RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 HIST1H1DP16402 221 aaKnown RBP4.1□□□□□ -1.75
SVIP-202ENST00000525670 HTR1DP28221 377 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 KCNJ3P48549 501 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 TMEM50BP56557 158 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 RPL39P5Q59GN2 51 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 C16orf87Q6PH81 154 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 CCBE1Q6UXH8 406 aaPredicted RBP4.1□□□□□ -1.75
SVIP-202ENST00000525670 OR2W3Q7Z3T1 314 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 GPR141Q7Z602 305 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 ZNF329Q86UD4 541 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 C3orf56Q8N813 242 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 SAMD12Q8N8I0 201 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 ZNF565Q8N9K5 539 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 Q8NFD4 153 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 OR11H6Q8NGC7 330 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 OR56B1Q8NGI3 324 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 OR13F1Q8NGS4 319 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 OR10R2Q8NGX6 335 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 OR9G1Q8NH87 305 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 FAM216AQ8WUB2 273 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 SLC25A38Q96DW6 304 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 ABHD14BQ96IU4 210 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 SLC25A33Q9BSK2 321 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 TM2D1Q9BX74 207 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 MRPL20Q9BYC9 149 aaKnown RBP4.1□□□□□ -1.75
SVIP-202ENST00000525670 DPAGT1Q9H3H5 408 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 RHOFQ9HBH0 211 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 C12orf4Q9NQ89 552 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 OR2S2Q9NQN1 319 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 RHBDL2Q9NX52 303 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 TAS2R3Q9NYW6 316 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 KCNIP1Q9NZI2 227 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 GHRLQ9UBU3 117 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 RNF150Q9ULK6 438 aa4.1□□□□□ -1.75
SVIP-202ENST00000525670 TBL2Q9Y4P3 447 aaKnown RBP4.1□□□□□ -1.75
SVIP-202ENST00000525670 TRAV18A0A075B6X5 111 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 SAA2-SAA4A0A096LPE2 208 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 A0A1W2PPI3 338 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A18PA6NE21 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A16PA6NEW6 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A20PA6NIJ5 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A7PA6NKC0 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FOXI3A8MTJ6 420 aaPredicted RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A22PA8MWA6 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A12PA8MX19 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A5PA8MXJ8 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A23PA8MXZ1 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 LEUTXA8MZ59 168 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 BUB1B-PAK6H3BSN5 160 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 MFNGO00587 321 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 GAS8-AS1O95177 125 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 IGKV1D-33P01593 117 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 IGKV1-33P01594 117 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 IGLV1-47P01700 117 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 RBP4P02753 201 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 EIF4EP06730 217 aaKnown RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 FCGR3AP08637 254 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A15PP0C7V4 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FAM90A14PP0C7W9 464 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 GSTT2P0CG29 244 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 GSTT2BP0CG30 244 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 SAA2P0DJI9 122 aaPredicted RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 TMEM11P17152 192 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 FGF9P31371 208 aaPredicted RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 TALDO1P37837 337 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 GNG2P59768 71 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 KRTAP10-3P60369 221 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 SPCS2Q15005 226 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 HERPUD1Q15011 391 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 HMGN3Q15651 99 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 KRTAP21-3Q3LHN1 58 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 TIMM50Q3ZCQ8 353 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 Q3ZCU0 254 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 IGSF11Q5DX21 431 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 OR2B11Q5JQS5 317 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 OR52W1Q6IF63 320 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 SNX29P2Q8IUI4 249 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 CDH26Q8IXH8 852 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 GVQW1Q8N7I0 195 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 DRAXINQ8NBI3 349 aaPredicted RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 OR2AK2Q8NG84 335 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 OR4C13Q8NGP0 309 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 ZNF596Q8TC21 504 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 CORO2AQ92828 525 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 MRPS24Q96EL2 167 aaKnown RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 ST6GALNAC5Q9BVH7 336 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 C1QTNF4Q9BXJ3 329 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 DCSTAMPQ9H295 470 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 LIN7CQ9NUP9 197 aaKnown RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 ABRACLQ9P1F3 81 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 DPM3Q9P2X0 92 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 COMMD3Q9UBI1 195 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 LINC00527Q9UJ94 153 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 RAB22AQ9UL26 194 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 TCF19Q9Y242 345 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 KCNK7Q9Y2U2 307 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 AMMECR1Q9Y4X0 333 aaPredicted RBP4.09□□□□□ -1.75
SVIP-202ENST00000525670 VWFP04275 2813 aa4.09□□□□□ -1.75
SVIP-202ENST00000525670 IGHV1-3A0A0C4DH29 117 aa4.08□□□□□ -1.76
SVIP-202ENST00000525670 IGKV1-6A0A0C4DH72 117 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms